Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01545 ATGGCTGCAGGTTCTTCTTCAAACTGGGTCATGGAAAGTGGTGATGTTCCTCATGTTTTGGCCGTTGATGACAACCTTATTGATCGCAAACTCGTTGAGAAACTCCTCAGGAATTCTTCTTGCAAAGTTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTATTGGGCTTGACAAGTGGTGGACAGAACACCATGAACGGTAGATCCAAAGTAAATTTGGTAATCACAGACTATTGCATGCCAGGGATGACAGGCTACGAGCTACTTAAGAAAATTAAGGAATCGTCTGTAATGAAGGAGGTTCCAGTAGTGATCATGTCTTCTGAGAACATACCAACACGGATTAACAAGTGTCTGGAAGAAGGAGCTCAGATGTTCATCCTAAAGCCCCTCAAACAATCTGATGTAAAAAAACTGACATGTCAGTTAATGAATTGA 441 0.4218 MAAGSSSNWVMESGDVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNTMNGRSKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIPTRINKCLEEGAQMFILKPLKQSDVKKLTCQLMN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01545 146 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 144 IPR045279 GO:0009736
Pumo10g01545 146 Pfam Response regulator receiver domain 19 139 IPR001789 GO:0000160
Pumo10g01545 146 FunFam Two-component response regulator ORR5 17 146 - -
Pumo10g01545 146 SUPERFAMILY CheY-like 17 144 IPR011006 -
Pumo10g01545 146 ProSiteProfiles Response regulatory domain profile. 18 145 IPR001789 GO:0000160
Pumo10g01545 146 SMART REC_2 17 141 IPR001789 GO:0000160
Pumo10g01545 146 CDD REC_typeA_ARR 19 140 - -
Pumo10g01545 146 Gene3D - 18 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01545 Pumo-Chr10 20440120 20442177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01545 2 146 Response Regulator Gene Family AT3G56380 68.243 2.07e-63 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo10g01545 Response_reg 1.8e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01545 K14492 - gmx:100778707 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01425 9 41609687 41611248 Pumo10g01545 10 20440120 20442177 PCT