Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01536 ATGAAGTTGCAGTTCTCTATTGTTGCACTTGTTCTATTAGGCTCCCCACTGTCTCTCTGTGGCCTGATTGCAGCTGACTTGAACTCTGACCAACAAGCTCTCTTGGAGTTTGCTTCAAGTGTCCCACATGCCCCAAGGCTCAACTGGAAGAATGACTCTGCTTCAATTTGCACCTCATGGGTTGGTGTGACATGCAACTCAAACGGCACACGTGTCATAGGCCTCCACCTTCCAGGAATGGGATTAACTGGGACCATTCCAGAGAACAGCATAGGAAAACTAGATGCTCTTAGGGTCCTGAGTCTTCATTCCAATGGCCTTAGAGGAAATCTTCCTTCTAACATACTCTCCATTCCTTCACTCCAATTTGCATACCTTCAGCACAATAGCTTCTCTGGCCTAATACCTTCTCCTGTGTCCCCTAAACTCGTGGCATTGGATATTTCCTTTAACTCCTTTTCTGGCAGCATCCCACCTGCTTTTCAGAACCTTAGAAGACTCACTTGGTTGTATCTCCAAAACAATTCCATATCTGGGGCTATTCCTGACTTCAACCTTCCGAGTCTCAAGCATTTGAACTTGAGCTATAATAACTTGAATGGCTCAATTCCAAATTCCATAAAGACATTCCCTTATACTTCTTTTGTTGGGAACTCTCTCTTATGTGGGCCACCTCTCAATCATTGCTCTACAATCTCCCCTTCTCCATCTCCTGCCACTGATTACGAGCCACTCACTCCACCAACCACCCAAAGCCAAAATGCTACCAACCATAAGAAAAACTTTGGCCTAGCTACTATACTTGCTCTAGTCATTGGGATCATTGCCTTCCTCTCTTTAATAGTTGTAGTGATCTGTGTGTTCTGTTTGAAGAAGAAGAAAAACAGTAAAAGCAGTGGCATACTGAAAGGAAAGGCTTCTTGTGCTGGAAAGGCTGAGGTTTCAAAGAGTTTTGGGAGTGGAGTGCAAGGGGCTGAAAAGAACAAGCTATTTTTCTTTGAAGGTTCCTCTTATAGCTTTGACCTTGAGGATTTGCTAAAGGCTTCAGCTGAAGTTCTTGGAAAAGGAAGTTATGGAACAGCATACAAGGCTGTTTTGGAGGAGGGAACAACAGTGGTAGTTAAAAGGTTGAAGGAAGTTGTGGTTGGCAAGAAGGAGTTTGAGCAGCAGTTGGAGATTGTGGGGAGAATTGGAGGCCACCCCAATGTGATGCCCCTAAGGGCTTATTACTATTCCAAAGATGAGAAACTTCTGGTTTACAACTACATGCCAGGTGGCAGCTTGTTTTTCTTGTTGCATGGAAACAGGGGAGCAGGAAGAACCCCACTAGACTGGGACTCAAGAGTGAAGATTTTGCTTGGAGCTGCCAAGGGAATTGCCTTCATCCACTCAGAGGGGGGTCCAAAGTTCACACATGGCAACATCAAGTCAACCAATGTGCTCATAACCCAAGAACTTGAAAGCTGCATCACTGATGTTGGACTGCCACCTCTAATGAACACCCCAGCAACCATGTCAAGAGCCAATGGCTACAGAGCCCCAGAAGTCACTGACTCAAGGAAGATCACTCACAAGTCTGATGTGTACAGCTTTGGAGTGCTGCTGCTTGAGATGCTGACAGGGAAGACCCCACTGAGGTACCCTGGCTATGAGGATGTGGTTGATCTTCCAAGGTGGGTGAGGTCTGTTGTGAGAGAGGAGTGGACTGCTGAAGTGTTTGATGAGGAGCTTCTGAGAGGGCAGTATGTTGAAGAGGAGATGGTGCAGATGCTTCAGATTGCATTGGCATGTGTGGCTAAGGGGCCAGACAATAGGCCTAGAATGGATGAGGTTGTTAGAATGTTGGAGGAAATTAAGCACCCTGAGTTGAAGAACCGGCCTTCCTCTGAGTCTGAGTCCAATGTGCAGACACCATGA 1917 0.4617 MKLQFSIVALVLLGSPLSLCGLIAADLNSDQQALLEFASSVPHAPRLNWKNDSASICTSWVGVTCNSNGTRVIGLHLPGMGLTGTIPENSIGKLDALRVLSLHSNGLRGNLPSNILSIPSLQFAYLQHNSFSGLIPSPVSPKLVALDISFNSFSGSIPPAFQNLRRLTWLYLQNNSISGAIPDFNLPSLKHLNLSYNNLNGSIPNSIKTFPYTSFVGNSLLCGPPLNHCSTISPSPSPATDYEPLTPPTTQSQNATNHKKNFGLATILALVIGIIAFLSLIVVVICVFCLKKKKNSKSSGILKGKASCAGKAEVSKSFGSGVQGAEKNKLFFFEGSSYSFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLKEVVVGKKEFEQQLEIVGRIGGHPNVMPLRAYYYSKDEKLLVYNYMPGGSLFFLLHGNRGAGRTPLDWDSRVKILLGAAKGIAFIHSEGGPKFTHGNIKSTNVLITQELESCITDVGLPPLMNTPATMSRANGYRAPEVTDSRKITHKSDVYSFGVLLLEMLTGKTPLRYPGYEDVVDLPRWVRSVVREEWTAEVFDEELLRGQYVEEEMVQMLQIALACVAKGPDNRPRMDEVVRMLEEIKHPELKNRPSSESESNVQTP 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01536 638 Gene3D Ribonuclease Inhibitor 87 234 IPR032675 -
Pumo10g01536 638 Gene3D Ribonuclease Inhibitor 23 86 IPR032675 -
Pumo10g01536 638 Gene3D Phosphorylase Kinase; domain 1 313 422 - -
Pumo10g01536 638 FunFam Leucine-rich repeat receptor-like protein kinase 140 229 - -
Pumo10g01536 638 MobiDBLite consensus disorder prediction 619 638 - -
Pumo10g01536 638 ProSitePatterns Protein kinases ATP-binding region signature. 353 384 IPR017441 GO:0005524
Pumo10g01536 638 Pfam Protein kinase domain 351 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01536 638 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 423 629 - -
Pumo10g01536 638 SUPERFAMILY Protein kinase-like (PK-like) 351 619 IPR011009 -
Pumo10g01536 638 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Pumo10g01536 638 PANTHER OS05G0588300 PROTEIN 13 630 - -
Pumo10g01536 638 SUPERFAMILY L domain-like 32 227 - -
Pumo10g01536 638 FunFam pollen receptor-like kinase 1 315 422 - -
Pumo10g01536 638 ProSiteProfiles Leucine-rich repeat profile. 188 210 IPR001611 GO:0005515
Pumo10g01536 638 MobiDBLite consensus disorder prediction 233 254 - -
Pumo10g01536 638 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01536 638 Gene3D Transferase(Phosphotransferase) domain 1 423 636 - -
Pumo10g01536 638 Pfam Leucine rich repeat 141 199 IPR001611 GO:0005515
Pumo10g01536 638 CDD STKc_IRAK 353 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01536 Pumo-Chr10 20310724 20315587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01536 18 636 Receptor kinase-like Gene Family AT5G58300 61.120 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo10g01536 Pkinase 2.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01536 - - gmx:100818444 1199.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01495 9 42634657 42638940 Pumo10g01536 10 20310724 20315587 PCT