Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01525 ATGGAGGAGGTTTTTCTGGCAATGAAAGTGGTTTGTTCAGTTGCTGTTGTGGGGATTCTAAGCTGGATTGTTTATGTGTATGGTAATCTGTGGCATGAGTCTCAAAGGGTGAGAAAGAGGCTACAAATGCAAGGTATAAAAGGGCCTCCACCTTCTTTTCTACATGGGAATCTGCCTGATATGCAGAGAATTCAATCTCAGGCCAGCAGCATAGCCAAAGCTTCCACCTCCAACTCCAACCATTCTGATCAGTTTCTAGCACATGACTACACTGCAACCCTCTTCCCCTATTTTGAACACTGGAGGAAACAATACGGTCTACTGTACACTTACTCCACAGGGATGAAGCAACACCTGTATGTGAACCAACCGGATCTAGTGAGAGAAATGAATCAGTGCATCACTTTGGATTTGGGTAAGCCTACTTATATAACAAACAAACTTGCACCTATGCTTGGCAATGGCATTTTGAGAGCTAACGGGCTCAGTTGGGCACAACAGAGGAAACTTGTTGCAGCTGAGTTCTTCATGGACAAAGTTAAGGGTATGGTGGGCCTAATGATAGAGTCTGCACAGCCATTACTACTAAAATGGGAGCAATTTATTGAGAGCCAAGGAAGTGCCACAGCTGAAGTTAAAGTGGATGTAGATTTGAGGGGCTTCTCAGCTGATGTTATTTCAAGGGTTTGCTTTGGCCATTCTTATTCCAAGGGAAAGGAAGTCTTCTCAAAGCTTAGAAGCATTCAGAAGGCCATGTCCAAGCATGGTGGCTTCCTTTTTGGGCTCAGCAGTTTCCGTGACAAACTGAAATATTTCTCGTCAAAGAAGCAAAACGAGATAGCAAGTTTGGAGAGAGAGATAGAGTCACTGATATGGGAGTTAGTGGAGGAACGCAAGAGGGAATGCTCAGAGACATCCTCATCAGAGAAGGATTTGATGCAGTTGCTGTTGGAAGCAGCCATGACTGATCAGAGTCTTGGGAAGGACTTTTCGAAGCGATTCATTGTGGATAACTGCAAAAACATTTACTTTGCTGGCCATGAAACCACTGCTGTTGCAGCCTCTTGGTGTCTGATGCTTCTTGCTTTGCACCCTGAGTGGCAGACTCGTATAAGGACTGAGGTGGCTGAACTTTGCCCCAATGGGATACCAGATGCAGATTCTGTCCCACTGTTGAAAACGGTGGCTATGGTGATTAAAGAAGTGCTACGTTTATACCCACCAGCAGCCTTTGTGTCAAGGGAGGCATATGAAGATATCCAAATTGGAAACCTCAATGTTCCTAAGGGCGTTTGTTTATGGACTCTGATCCCAACACTGCACAGAGATCCTGAAATTTGGGGACCAGATGCCAATGAGTTTAAACCAGAAAGGTTCAGTGAGGGTGTCTCTAAAGCTTGCAAGTTTCCACATGCTTATGTGCCATTTGGATTGGGTACTCGCTTGTGTTTGGGAAAGAACTTTGCAATGGTTCAATTGAAGGTTGTTCTAGCCCTTATCATCTCCAAGTTTAGCTTCTCTCTGTCTCCTAGCTATAGGCATTCTCCGGCATATAGAATGATTGTAGAACCGGGACATGGTGTATATATTCTCATTCAGAAGATTTGA 1608 0.444 MEEVFLAMKVVCSVAVVGILSWIVYVYGNLWHESQRVRKRLQMQGIKGPPPSFLHGNLPDMQRIQSQASSIAKASTSNSNHSDQFLAHDYTATLFPYFEHWRKQYGLLYTYSTGMKQHLYVNQPDLVREMNQCITLDLGKPTYITNKLAPMLGNGILRANGLSWAQQRKLVAAEFFMDKVKGMVGLMIESAQPLLLKWEQFIESQGSATAEVKVDVDLRGFSADVISRVCFGHSYSKGKEVFSKLRSIQKAMSKHGGFLFGLSSFRDKLKYFSSKKQNEIASLEREIESLIWELVEERKRECSETSSSEKDLMQLLLEAAMTDQSLGKDFSKRFIVDNCKNIYFAGHETTAVAASWCLMLLALHPEWQTRIRTEVAELCPNGIPDADSVPLLKTVAMVIKEVLRLYPPAAFVSREAYEDIQIGNLNVPKGVCLWTLIPTLHRDPEIWGPDANEFKPERFSEGVSKACKFPHAYVPFGLGTRLCLGKNFAMVQLKVVLALIISKFSFSLSPSYRHSPAYRMIVEPGHGVYILIQKI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01525 535 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g01525 535 PRINTS E-class P450 group I signature 334 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g01525 535 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g01525 535 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g01525 535 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g01525 535 PRINTS E-class P450 group I signature 221 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g01525 535 Coils Coil 273 300 - -
Pumo10g01525 535 Gene3D Cytochrome P450 30 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g01525 535 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 527 - -
Pumo10g01525 535 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g01525 535 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g01525 535 PRINTS P450 superfamily signature 483 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g01525 535 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g01525 535 Pfam Cytochrome P450 92 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g01525 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
Pumo10g01525 535 SUPERFAMILY Cytochrome P450 89 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01525 Pumo-Chr10 20147286 20154870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01525 126 532 Cytochrome P450 AT5G24900 58.010 2.46e-180 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01525 K20661 - gmx:100815776 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01525 10 20147286 20154870 Pumo10g01525 10 20147286 20154870 ECH