Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01500 ATGGGTTCGGTGGGCTGTTATACGTCTCGTGGGGACGATGTGGCTGTGGTGTCTCTGGATTCGCTACCGTTAGGGTTCCGATTCCGACCTACCGACGAGGAACTCATCAATTACTACCTGCGAAAGAAGATCAACGGTAATGGTCGCGAGGTTTGGGTTATCCGAGAGATTGATGTCTGCAAATGGGAGCCTTGGGACATGCCCGGTTTGTCGGTGATACAGACCAAGGATCCGGAGTGGTTCTTCTTCTGTCCACAGGACCGAAAGTATCCAAATGGGCATCGATTGAACAGAGCGACGAATAATGGGTATTGGAAGGCAACGGGGAAGGATCGTAAAATAAAGTCTGATGAGAAGATTTTGATTGGAATGAAGAAGACTTTGGTGTTCTACACTGGTCGTGCACCCAAAGGGAATAGGACCAATTGGGTTATGCACGAGTACCGCCCCACTTTGAAGGAGCTTGATGGTACCAATCCTGGACAGAATGCATATGTCATTTGTCGCTTGTTTAAGAAACATGATGAGAGCCTTGAAGTTTCGCACTGTGATGAAGCAGATGCAGAACAGACTCCTTCAACTCCTGTGGCTGCCTCTACAGAGGAAATACAATCTGATCCTGCTGTTATTGCTGTATCCTCGTCACAGGTTACAGAAGATCATAAGCATCAGGCAATTATCCCTGCGCACTCTGAGGAAGCAATATCCAATGTTATAACCCCGGTTGATTGCCCTAGTGATGGATATGATGCTTGTGTTGAACAAAATCAAATTGTGACACCAGTTGCAGAGGAGTTTCAGCCATTGGACTTAGATATATATTATGACCCAAGAAACGAGCTGTTGGATGGCAAATTATTCCCCCCTGTACTTCCACATATTCAACCAGAATTTCATTATCAAGCAAACATCGAATCAGATGGTCGATATGGACTTCAATATGGTACAGATGAGACAAACATTTCAGAATTTTTGAATTCAGTTGTTAACTGGGATCAACTACCCTATGAGGATCCCAATTGTCAACAGCAGAGCTACCCCTTGTTTGATGTTAAGGATAACGTATTAGGCAGCGACATGGATTCTGAACTTGCCAATATGACATGTATGCAAGCTGGTTATGCTGAGGGGGCAATTGACAGAAGGATTCCTTTGGTGATAACTCCAGAATTTTGCAGCACCACTGGCATCCCCGTTGACCATGGTGGTGGTGAGCAGAAAAGCAATGTTGAGTTATTTCAAAACAATTCCCAGAGAGCTTTTACTGATGTTAATATGGGCCAAGTGTACAATTTAGTCAATGATTATGAGCAACCAGGAATCTATAGTGCAGTTGCTAGTCATGATACTGGAATCATAAGGAGGCATCGTGGGGTACGAAATGAACAGCTAAGCACAAACTCAACACAAGGTACTGCACAGAGGAGAATTCGTTTGTTAATGGCTACACATGGCTCAAATAAGATGGTGAAAAGTGGAAGTTGTGCACAAGAAGAGCTTAATTCAAAACCAATCATTGCTGTGGAGGAGAAAGCTTCAGAAAACCATGCTTCTGATGAAAGTGCTACTCTTACTGATGATGAGAATGAACTGCAGAAGACACCTGAGTCAACCGGCAAAAGAAAGATTTCTCGACAAGTTACAAAAGCAGGTTCCAGCCTGGGGTTAAAAGACTTTTTATTGCTCAGAAGGGTGCCTTACATTTCAAAGGCTTCCTCCAATCGCACCAAGTGCTCTTCTGTTTTTGTAGTTTCTGCCTTTGTAATGGTCTCATTAGTGGTCTTTACTGACATTTGGGGATATCTTAAATTTTAA 1815 0.4353 MGSVGCYTSRGDDVAVVSLDSLPLGFRFRPTDEELINYYLRKKINGNGREVWVIREIDVCKWEPWDMPGLSVIQTKDPEWFFFCPQDRKYPNGHRLNRATNNGYWKATGKDRKIKSDEKILIGMKKTLVFYTGRAPKGNRTNWVMHEYRPTLKELDGTNPGQNAYVICRLFKKHDESLEVSHCDEADAEQTPSTPVAASTEEIQSDPAVIAVSSSQVTEDHKHQAIIPAHSEEAISNVITPVDCPSDGYDACVEQNQIVTPVAEEFQPLDLDIYYDPRNELLDGKLFPPVLPHIQPEFHYQANIESDGRYGLQYGTDETNISEFLNSVVNWDQLPYEDPNCQQQSYPLFDVKDNVLGSDMDSELANMTCMQAGYAEGAIDRRIPLVITPEFCSTTGIPVDHGGGEQKSNVELFQNNSQRAFTDVNMGQVYNLVNDYEQPGIYSAVASHDTGIIRRHRGVRNEQLSTNSTQGTAQRRIRLLMATHGSNKMVKSGSCAQEELNSKPIIAVEEKASENHASDESATLTDDENELQKTPESTGKRKISRQVTKAGSSLGLKDFLLLRRVPYISKASSNRTKCSSVFVVSAFVMVSLVVFTDIWGYLKF 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01500 604 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
Pumo10g01500 604 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 21 222 - -
Pumo10g01500 604 MobiDBLite consensus disorder prediction 512 543 - -
Pumo10g01500 604 ProSiteProfiles NAC domain profile. 22 173 IPR003441 GO:0003677|GO:0006355
Pumo10g01500 604 MobiDBLite consensus disorder prediction 512 546 - -
Pumo10g01500 604 FunFam Nac domain-containing protein 86 31 176 - -
Pumo10g01500 604 Gene3D NAC domain 31 177 IPR036093 GO:0003677|GO:0006355
Pumo10g01500 604 SUPERFAMILY NAC domain 18 173 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01500 Pumo-Chr10 19910985 19914582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01500 14 212 NAC Transcription Factor Family AT4G35580 66.500 2.99e-90 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pumo10g01500 NAM 2.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01500 - - gmx:100777071 1046.57