Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01490 ATGGGTTCAACAGGTGAGACTCAGATTACCCCAACCCATGTGTCTGATGAAGAGGCAAACCTTTTCGCCATGCAACTAGCCAGTGCCTCTGTCCTCCCTATGGTACTCAAATCAGCTCTTGAGCTTGATCTGTTGGAAATCATAGCCAAGGCTGGCTCCGGAGTTCACCTTTCCCCCACTGACATTGCTTCTCAGCTCCCAACACAAAACCCTGATGCACCCGTCATGTTGGACCGCATATTGCGCCTCTTGGCTTGCTACAATATCCTCTCTTTTTCTCTTCGCACTCTCCCTGATGGCAAGGTTGAGAGGCTCTATGGCCTCGCCCCTGTTGCTAAGTACTTGGTCAAGAACGAAGATGGTGTCTCCATTGCTGCTCTCAACCTCATGAACCAGGACAAAGTCCTCATGGAAAGCTGGTACTATTTGAAAGATGCTGTCCTTGAAGGAGGCATTCCATTTAACAAGGCGTATGGAATGACAGCCTTTGAATACCATGGAACAGATCCAAGGTTTAACAAGGTTTTCAACAAGGGGATGGCTGATCACTCTACCATTACAATGAAGAAAATTCTTGAGACCTACACAGGCTTTGAGGGTCTTAAATCTCTGGTTGATGTTGGTGGAGGAACTGGAGCTGTAGTCAACATGATTGTCTCAAAGTATCCCACTATTAAGGGCATTAATTTTGATTTGCCCCATGTCATTGAAGATGCCCCATCTTATCCAGGAGTGGAGCATGTCGGTGGAGATATGTTTGTCAGTGTTCCAAAAGCTGATGCTATTTTTATGAAGTGGATTTGTCACGATTGGAGTGATGAGCACTGCTTGAAGTTTTTGAGGAACTGCTACGAAGCACTACCAGACAATGGGAAGGTGATTGTGGCGGAATGCATTCTTCCAGTGGCTCCAGACTCTAGCTTGGCCACAAAGGGTGTGGTTCACATCGATGTGATCATGTTGGCTCATAATCCAGGTGGGAAAGAGAGAACAGAGAAAGAGTTTGAGGCTCTGGCCAAAGGGTCTGGATTCCAAGGTTTCCGAGTCGTGTGCTGTGCTTTCAATACCTACGTTATGGAATTTCTCAAAAAGCTTTAA 1098 0.4636 MGSTGETQITPTHVSDEEANLFAMQLASASVLPMVLKSALELDLLEIIAKAGSGVHLSPTDIASQLPTQNPDAPVMLDRILRLLACYNILSFSLRTLPDGKVERLYGLAPVAKYLVKNEDGVSIAALNLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMADHSTITMKKILETYTGFEGLKSLVDVGGGTGAVVNMIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAIFMKWICHDWSDEHCLKFLRNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEKEFEALAKGSGFQGFRVVCCAFNTYVMEFLKKL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01490 365 Gene3D - 1 115 IPR036388 -
Pumo10g01490 365 CDD AdoMet_MTases 204 295 - -
Pumo10g01490 365 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Pumo10g01490 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 361 IPR029063 -
Pumo10g01490 365 Pfam O-methyltransferase domain 140 345 IPR001077 GO:0008171
Pumo10g01490 365 SUPERFAMILY "Winged helix" DNA-binding domain 15 119 IPR036390 -
Pumo10g01490 365 FunFam Caffeic acid O-methyltransferase 116 363 - -
Pumo10g01490 365 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Pumo10g01490 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 363 IPR016461 GO:0008168
Pumo10g01490 365 Gene3D Vaccinia Virus protein VP39 116 363 IPR029063 -
Pumo10g01490 365 PANTHER O-METHYLTRANSFERASE 23 344 IPR016461 GO:0008168
Pumo10g01490 365 FunFam Caffeic acid 3-O-methyltransferase 3 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01490 Pumo-Chr10 19811866 19819652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01490 1 365 Monolignol Biosynthesis Gene Families AT5G54160 79.178 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01490 K13066 - gmx:100805999 722.62