Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01482 ATGGTGTTGCCACTTGCTCTCTCCGCAAACCATTCATGTTTGTGTTCTTCTACCACCTTTCATCCACACCCATTACTGAACTCTTCTTCACCCTCCCTTCATTATTCACCTTCAACCTTCCATCCTAAACTTCAATCTCAACCCCAATGCTCCCTCACCAAACCACAACCATCAAACAAGTCCTCCATTCACCGCCGCCGCTGCAGTAATTCCCTCACCATTGCCGACGCCGAATTCGCGTCGTTCATTTCTCTGTTTCAAGACATTGGAATCGGCTTTGAGGAGACCCAACCGCTCTTGTTGAACAACCCTGACCTTACTTCCGTCTCAGTTGACTCGTTACGCGCTCGCGTTCTCTCTCTGCACTCTCTCGGCCTCGACCCTCTCACTCTTTGCAAATTAGTCACAAAGCGCCCAACCGTGTTAACAGCCAACGAAATTGACCCTTTGTTAACCTTCCTGAGAGACAAATTGCAAGGAAAACTCGACAAACAGCAACTCAATCGTCTCTTATCTGCTACGGAACAAAAATTCGTGGAGAGTTTTCCTCAGAAGGTTCAATTCCTCGTTGACCGAGGAATCCCCGTTGACCAGGTTGTGCACGTGCTCAACAAAGTGAATCTGGCAAAGTTCTTGTGTCGCAGGTCGGTTGAAGAGATTGACCGAACCATATCCTTCTTAGAACCCTTTGGTGGCATTGCTTTGATTCTGAAACGCCCTCAAATTTTGAACCATGATTTGGATACTCAAATTATTCCTAGAGTCAAATTTCTGATGGAGCTTAGTGATGGAGATGAGGATAGTGTTGGGAAAGTGCTGCTTAGGTTTCCCATATTTTTGAACTATAGTGTGGAACATGTGGAGGAACATGTAGGGTTTCTGAGTTCTTTTGCTGAGCTTGATTACAAACAGATATTTAGGATAATACAAATTTACCCTGCGATTGTTACTACTAGCAGAGAGAGGAAACTTCGTCCTAGAATACAGTTTCTCAAGGAATGTGGGTTGGATTCAGGAGACATCTTCAAGTTCTTGATTAAAGGGCCCACGTTTCTAAGCATTTCGTTCAATGAGAACATCGCGTATAAGCTGGTATTGCTGGTGAAGATTGGCTATAGGTATAGGTCAAAGGACTTGGCAATGGCAATTAGGTCTGCTACTAGGACAAACTGTGGGAACATGCAGAAGGTCATTAGTTTGTTCTTGAATTATGGGTTTTCGTGTGAAGACATTGTTGCTATGAGCAAGAAGCAGCCGCAGATATTGCAGTATAATCATGATTCTTTGGAGAAGAAGATGGAGTACTTGATAGAGGAGATGGGGCGTGACATTGAGGAGTTGCTGCTTTTTCCTGCATTTCTTGGGTACAAGTTTGATGATAGGATTAAGCATAGGTTTGAAGTGAAGAAGAGTGTTAGAGGCAGGAAAATGTCTATCAATAAGCTTTTAACTGTTTCTGAGGAGACATTTGCTGGCAAAAGAAAAAAGGCCCATGCCATAGCCGATCTTGAGTTAAATAAAGGCGAATAA 1530 0.4366 MVLPLALSANHSCLCSSTTFHPHPLLNSSSPSLHYSPSTFHPKLQSQPQCSLTKPQPSNKSSIHRRRCSNSLTIADAEFASFISLFQDIGIGFEETQPLLLNNPDLTSVSVDSLRARVLSLHSLGLDPLTLCKLVTKRPTVLTANEIDPLLTFLRDKLQGKLDKQQLNRLLSATEQKFVESFPQKVQFLVDRGIPVDQVVHVLNKVNLAKFLCRRSVEEIDRTISFLEPFGGIALILKRPQILNHDLDTQIIPRVKFLMELSDGDEDSVGKVLLRFPIFLNYSVEHVEEHVGFLSSFAELDYKQIFRIIQIYPAIVTTSRERKLRPRIQFLKECGLDSGDIFKFLIKGPTFLSISFNENIAYKLVLLVKIGYRYRSKDLAMAIRSATRTNCGNMQKVISLFLNYGFSCEDIVAMSKKQPQILQYNHDSLEKKMEYLIEEMGRDIEELLLFPAFLGYKFDDRIKHRFEVKKSVRGRKMSINKLLTVSEETFAGKRKKAHAIADLELNKGE 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01482 509 PANTHER CGI-12 PROTEIN-RELATED 50 211 IPR003690 GO:0003690|GO:0006355
Pumo10g01482 509 Gene3D Transcription termination factor 3, mitochondrial 289 499 IPR038538 -
Pumo10g01482 509 Gene3D Transcription termination factor 3, mitochondrial 69 262 IPR038538 -
Pumo10g01482 509 SMART mt_12 233 264 IPR003690 GO:0003690|GO:0006355
Pumo10g01482 509 SMART mt_12 412 443 IPR003690 GO:0003690|GO:0006355
Pumo10g01482 509 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Pumo10g01482 509 SMART mt_12 306 337 IPR003690 GO:0003690|GO:0006355
Pumo10g01482 509 SMART mt_12 342 373 IPR003690 GO:0003690|GO:0006355
Pumo10g01482 509 SMART mt_12 444 476 IPR003690 GO:0003690|GO:0006355
Pumo10g01482 509 SMART mt_12 97 127 IPR003690 GO:0003690|GO:0006355
Pumo10g01482 509 SMART mt_12 132 161 IPR003690 GO:0003690|GO:0006355
Pumo10g01482 509 MobiDBLite consensus disorder prediction 37 64 - -
Pumo10g01482 509 FunFam - 62 262 - -
Pumo10g01482 509 Pfam mTERF 326 491 IPR003690 GO:0003690|GO:0006355
Pumo10g01482 509 Pfam mTERF 83 367 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo10g01482 mTERF 1.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01482 - - gmx:100799904 853.973