Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01465 ATGGGTGAATTATTTGGCCTTGGAAAAAGAAGGAGCAACAACAACAATAACAACAGTGCTAGTAGCGTTCTTGGGTTGGATGTGAAGGTGAAGAGCCCTGAAGCATTATTCCATAATAGGATGACGATGATGGCGCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATGATTCCTGTGCTGCTGATGGCGATGGTCCCACGGCTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGGTGCTTCTGTTCTTGGTCCTGCTATTGATGGTGGCTGTTGTGCTGCTCTTGCACCTGTTGTAAGAACTTTGCAGCCTTTTGACATTTCTCCTTATACTACTTCTCCAACCACCACTACCACAACCTTCAAACCCCCCTCAGCAGGTGGGATGGCGGCTTCGTTGGGGTTTCCTTTCACAAGTGCACAATGGAGGGAGCTTGAAAGACAAGCTATGATATACAAGTACATGATGGCTTCTGTTCCTGTTCCACCTGATCTCCTCATTCCTTCTTCACTCACACCCTCTTCTCGCTCTTCCTGCAGTATGAATGACCCTTTGCTTTCTCGTGCCTGTTAA 591 0.4569 MGELFGLGKRRSNNNNNNSASSVLGLDVKVKSPEALFHNRMTMMAHHNHHHRPLSSPFDNDSCAADGDGPTAYMSFTNHINLVSGASVLGPAIDGGCCAALAPVVRTLQPFDISPYTTSPTTTTTTFKPPSAGGMAASLGFPFTSAQWRELERQAMIYKYMMASVPVPPDLLIPSSLTPSSRSSCSMNDPLLSRAC 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01465 196 ProSiteProfiles QLQ domain profile. 142 177 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pumo10g01465 196 Pfam QLQ 142 173 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pumo10g01465 196 SMART QLQ_2 141 177 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pumo10g01465 196 PANTHER GROWTH-REGULATING FACTOR 5 118 178 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pumo10g01465 196 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01465 Pumo-Chr10 19545389 19546185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01465 141 185 GRF Transcription Factor Family AT5G53660 68.889 9.28e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01465 - - gmx:100803096 258.84