Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01462 ATGGCAAGAATTTTGGGGCAAAGTTCGAGTTGGGGAAGGAAGTGGGTCGAGGGCATTTTGGTCACACGTGTTGGGCCAAGGGGAAGAAGGGTGACCTTAAGGGACAATCTGTTCGCTGTGAAAATCATATCTAAAGCTAAGATGACTTCAGCAATTGCAATTGAAGATGTACGGAGGGAGGTGAAAATGTTGAAGGCCTTATCTGGACATAGGAATTTGGTCAAGTTTTATGATGCATTTGAGGATGTCAACAACGTTTACATTGTTATGGAGTTGTGTGAGGGTGGAGAATTACTTGACAGAATTCTAGATAGAGGTGGAAGATACCCAGAGGATGACGCTAAAGCTATTCTTGTACAAATTCTAGATGTAGTTGCGTTTTGTCATCTTCAAGGAGTAGTTCACCGTGATCTAAAACCAGAGAATTTTCTTTTTGTCTCAAAAGAAGAGGATGCTGCGATGAAAGTTATTGATTTTGGGCTATCTGATTTTGTAAGGCCAGATCAACGCCTCAATGATATTGTTGGCAGTGCCTACTACGTTGCACCTGAAGTGCTCCATAGATCTTATAGTGTTGAAGGAGATTTATGGAGTATTGGGGTTATATCATACATATTGTTGTGTGGAAGTAGACCATTTTGGGCACGCACTGAATCAGGAATTTTCCGATCTGTCTTAAGAGCGAATCCTAACTTTGATGATTCACCTTGGCCATCAATATCACCAGAAGCTAAAGACTTTGTGAAGAGACTTCTGAACAAGGACCACAGGAAAAGGATGACTGCTGCTCAAGCTTTAGCTCACCCATGGTTGAGAAACGAAAAAAATGCTATTCCTTTAGATATTTTGATTTACAAGTTAGTAAAGTCATACGTGCGTGCCTCACCTTTGAGACGTGCAGCATTGAAGGCTCTCGCGAAAGCATTGACAGAAGACGAGCTAATCTACCTTAGAGCGCAGTTTAACCTCTTGGAGCCTAAAGATGGCTGCATTTCGCTTGAGAATTTTAGAGTTGCTCTCATGAAAAATGCAACTGATGCCATGAAGGAGTCAAGGGTCCCTGAAATTTTAAATTTGATGGAGCCACTCTCCTATAAAAAAATGGACTTCGAAGAGTTTTGCGCTGCGGCAATCAGTGTATACCAGCTGGAAGTTCATCAAGAATGGGATAGAATCGCTACCACAGCTTTTGAGAATTTTGAGGAAACAGGAAACCGAGTCATTTCAGTTGAGGAGTTGGCTCAGGAGATGAATTTGGGTCCATCAGCCTACTCTTTAATGGGTGATTGGATCAGAAAATCTGATGGAAAACTCAGCTCGATCGGATATACAAAGTTTTTGCATGGTGTCACAATGCGTAGTTCAAATACAAGACACCGACAGCTAGTATAA 1392 0.4167 MARILGQSSSWGRKWVEGILVTRVGPRGRRVTLRDNLFAVKIISKAKMTSAIAIEDVRREVKMLKALSGHRNLVKFYDAFEDVNNVYIVMELCEGGELLDRILDRGGRYPEDDAKAILVQILDVVAFCHLQGVVHRDLKPENFLFVSKEEDAAMKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEGDLWSIGVISYILLCGSRPFWARTESGIFRSVLRANPNFDDSPWPSISPEAKDFVKRLLNKDHRKRMTAAQALAHPWLRNEKNAIPLDILIYKLVKSYVRASPLRRAALKALAKALTEDELIYLRAQFNLLEPKDGCISLENFRVALMKNATDAMKESRVPEILNLMEPLSYKKMDFEEFCAAAISVYQLEVHQEWDRIATTAFENFEETGNRVISVEELAQEMNLGPSAYSLMGDWIRKSDGKLSSIGYTKFLHGVTMRSSNTRHRQLV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01462 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Pumo10g01462 463 FunFam CDPK-related kinase 1 49 97 - -
Pumo10g01462 463 SUPERFAMILY Protein kinase-like (PK-like) 34 292 IPR011009 -
Pumo10g01462 463 Gene3D Transferase(Phosphotransferase) domain 1 99 289 - -
Pumo10g01462 463 Gene3D - 290 378 - -
Pumo10g01462 463 SUPERFAMILY EF-hand 303 447 IPR011992 -
Pumo10g01462 463 SMART serkin_6 21 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01462 463 FunFam CDPK-related kinase 1 306 378 - -
Pumo10g01462 463 CDD STKc_CAMK 37 270 - -
Pumo10g01462 463 Gene3D Phosphorylase Kinase; domain 1 29 98 - -
Pumo10g01462 463 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 434 - -
Pumo10g01462 463 Pfam Protein kinase domain 35 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01462 463 ProSiteProfiles Protein kinase domain profile. 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01462 463 Gene3D - 295 419 - -
Pumo10g01462 463 FunFam CDPK-related kinase 1 99 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01462 Pumo-Chr10 19466849 19474568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01462 48 460 EF-hand Containing Proteins AT2G46700 75.604 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo10g01462 Pkinase 2.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01462 - - gmx:100803631 821.617