Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01461 ATGGGGATTCTTAGCGATAATCATAATCATCATCACATGAGCTTTCATTTGCACATTCCTCACATCCACTTTCACCAGCACCATCACCATCACCATGATGAGAAGGATCTTAAGGACATCCCAAAAGGGTGTTTGGCAATATTGGTGGGGCAAGGGGAGGAGCAACAGAGGTTTGTGATCCCCGTGATGTACATGAACCACCCATTGTTCATGCAGTTGCTGAAAGAAGCTGAAGAGGAATATGGTTTCGATCAGAAAGGCCCCATCACCATTCCATGCCACGTGGAGCACTTCCGCACCGTCCAAGGCTTGATTGATAGGGACAAATCTCTCCACCATCACCACCATGCTTGGTGCTTCAAAGTTTGA 369 0.4715 MGILSDNHNHHHMSFHLHIPHIHFHQHHHHHHDEKDLKDIPKGCLAILVGQGEEQQRFVIPVMYMNHPLFMQLLKEAEEEYGFDQKGPITIPCHVEHFRTVQGLIDRDKSLHHHHHAWCFKV 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01461 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 32 100 IPR003676 GO:0009733
Pumo10g01461 122 Pfam Auxin responsive protein 34 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01461 Pumo-Chr10 19463124 19464150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01461 39 99 Calmodulin-binding Proteins AT5G20810 57.377 1.65e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01461 K14488 - gmx:100526867 192.586