Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01447 ATGGCGGCTTTTACATCAATTACTGTACAGTACTCATCCACATCATCTTTACAATCTTTGGTACCTTCTTTAGAAGCTACACGTGATCATAATTCACGGTGGGGGAGAGTGAGATCATACAAATCCACTGGAAAAAGATCTCTCCAACAGAATAATATCACAAGAGGCTTAACAATCCAGAATGCAGCCACAAAACCAGCAAAGTCGCCAGCTGAAGAAGACTGGAAGGTTAAGCGAGAATATCTGTTGGAGAAAAGGGTAAGAAGTGTGGATGCGAAGGAAGCTCTGCGCCTTCAGAAAGAAAATAATTTTGTGATTCTCGACGTAAGGCCAGAAGCAGAGTTCAAAGAGGCTCATCCTCCAGATGCTATCAATGTGCAAATATATAGGCTTATAAAAGAGTGGACAGCATGGGACATTGCCAGACGTGCTGCATTTGCATTTTTTGGTATTTTTGCCGGGACTGAAGAGAACCCCGAGTTCATCCAGACTGTTGAAGCAAAATTAGATAAAAATGCAAAGATAATAGTAGCTTGCTCGGCAGGGGGTACAATGAAACCATCACAAAATCTGCCCGAAGGTCAACAATCAAGGTCTCTCATAGCAGCTTACTTGCTGGTCCTTAATGGCTTTACCAATGTCTTCCATCTTGAAGGTGGTCTTTACTCATGGTTTAAAGAGGATCTGCCAAGTGTTTCAGAGGAGTGA 708 0.4251 MAAFTSITVQYSSTSSLQSLVPSLEATRDHNSRWGRVRSYKSTGKRSLQQNNITRGLTIQNAATKPAKSPAEEDWKVKREYLLEKRVRSVDAKEALRLQKENNFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFIQTVEAKLDKNAKIIVACSAGGTMKPSQNLPEGQQSRSLIAAYLLVLNGFTNVFHLEGGLYSWFKEDLPSVSEE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01447 235 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 15 234 IPR043186 -
Pumo10g01447 235 SMART rhod_4 90 230 IPR001763 -
Pumo10g01447 235 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 84 230 IPR036873 -
Pumo10g01447 235 CDD RHOD 94 224 - -
Pumo10g01447 235 Gene3D - 85 234 IPR036873 -
Pumo10g01447 235 ProSiteProfiles Rhodanese domain profile. 100 233 IPR001763 -
Pumo10g01447 235 Pfam Rhodanese-like domain 92 225 IPR001763 -
Pumo10g01447 235 FunFam Rhodanese-like domain-containing protein 14, chloroplastic 74 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01447 Pumo-Chr10 19302905 19305687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01447 1 230 Sulfurtransferasese or Rhodanese AT4G27700 67.391 6.80e-108 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01447 - - gmx:100788147 429.098