Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01411 ATGGGGAAGAAAGGAGGGAGCTGGTTCTCGTCGGTGAAGAAAGTTTTCAAGTCCTCTTCTAAGGAATCGCCGGTGCCGGAGAAGAAGAAAGACAACAACAAGGAACAGCAGTGCCAGCATGAAGCTCCAGAGGAGGTGTCTGTGGAGCATTTTCCTGCAGAGAGTTCTCCAGATGTTACCAATGAAGGGAGCACCACATCAACACCAGTGACTGAAGATAGAAACCATTCCATTGCCTTTGCAGCAGCAACTGCCGCCGCCGCCGAAGCGGCGGTGGCAGCTGCTCAAGCAGCCGCTAGAGTTGTGAAATTGGCAGGTTATGGACGCCAGTCCAAGGCAGAAAGAGCTGCAATACTCATTCAATCATACTACAGAGGCTACCTTGCTCGACGTGCACTGCGTGCTTTGAAGGGATTAGTGAGGCTGCAAGCACTTGTGAGGGGACATAATGTGCGAAAGCAAGCTCAGATGACAATGCGATGCATGCATGCATTAGTCAGAGTACAGGCAAGAGTAAGAGCTCGCAGACTCCAGTTGACTGAGGAGAAGCTTCAGAGAAGAGTTGAGGAGCAGGTCCAAAGAGAACTAGAGGAACATGAACCTAAGCTTTTGAGCCCCATCAAAATGTTAGACATGGATGGTTGGGACAGTAGGCGCCAAAGTAGCCAGCAAATTAAGGAAAATGATTTGAGGAAACATGAAGCAGCAATGAAGAGGGAGAGAGCTCTTGCTTACGCTTTCAACTGCCAGCAGCAACTGAAGCAATACATGCACATAGACCCAAATGGTGATGATATTGGAAGTTATACCACTGAGCGTGAAAGAGCCCAATTGGATTGGAACTGGTTGGAACGTTGGATGTCATCACAATCACCCAACTTAAGACCACGTGAGACCTTTTATAGGACTCTTGCTACAACTACTTCCACCACTGATGACATGTCTGAAGAAAAGACAGTTGAAATGGACATGGCTGCAACTCTGGACTCAACTCATGCTAACATGGGCCTCATCAACCAAGAATCTTTTGACACGAGCCCAATTGCTAATAGGTACCACCAGAGACACTATAGTGCTGGTGTCCCTAGCTACATGGCCCCAACCCAGTCTGCAAAGGCCAAGGCTCGGAGTGAAGGCCCGTTTAAGCAACGGGGTTCACCTGGGCCTCACTGGAACTCATCCACGAGGAGAAGTTCTGCTATTGGGTTGGGCTGTGACTCATCTAGCTCTGGTGGGCCCACTGCAGCTCATGTCTTCCCAAGAAGCCCAAACCCAAAAATTAACGAGATTCGCCTCCAATCTAGACGGATTTCAGGTGGCAGCCCAGATAATGTTCACATTGAGGATTGGGCCCTTCCCCTTGGAGCCAATGGTTGGGCCTGA 1383 0.4953 MGKKGGSWFSSVKKVFKSSSKESPVPEKKKDNNKEQQCQHEAPEEVSVEHFPAESSPDVTNEGSTTSTPVTEDRNHSIAFAAATAAAAEAAVAAAQAAARVVKLAGYGRQSKAERAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMHALVRVQARVRARRLQLTEEKLQRRVEEQVQRELEEHEPKLLSPIKMLDMDGWDSRRQSSQQIKENDLRKHEAAMKRERALAYAFNCQQQLKQYMHIDPNGDDIGSYTTERERAQLDWNWLERWMSSQSPNLRPRETFYRTLATTTSTTDDMSEEKTVEMDMAATLDSTHANMGLINQESFDTSPIANRYHQRHYSAGVPSYMAPTQSAKAKARSEGPFKQRGSPGPHWNSSTRRSSAIGLGCDSSSSGGPTAAHVFPRSPNPKINEIRLQSRRISGGSPDNVHIEDWALPLGANGWA 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01411 460 MobiDBLite consensus disorder prediction 20 48 - -
Pumo10g01411 460 MobiDBLite consensus disorder prediction 376 425 - -
Pumo10g01411 460 MobiDBLite consensus disorder prediction 57 73 - -
Pumo10g01411 460 Pfam Protein of unknown function (DUF4005) 346 400 IPR025064 -
Pumo10g01411 460 Coils Coil 174 194 - -
Pumo10g01411 460 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Pumo10g01411 460 Gene3D - 110 164 - -
Pumo10g01411 460 MobiDBLite consensus disorder prediction 387 415 - -
Pumo10g01411 460 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Pumo10g01411 460 SMART iq_5 135 156 IPR000048 GO:0005515
Pumo10g01411 460 SMART iq_5 112 134 IPR000048 GO:0005515
Pumo10g01411 460 MobiDBLite consensus disorder prediction 15 73 - -
Pumo10g01411 460 PANTHER IQ-DOMAIN 5-RELATED 1 399 - -
Pumo10g01411 460 Pfam IQ calmodulin-binding motif 114 134 IPR000048 GO:0005515
Pumo10g01411 460 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01411 Pumo-Chr10 18841020 18845611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01411 1 431 IQD Protein Family AT3G49260 49.130 9.17e-98 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01411 - - gmx:100808965 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01411 10 18841020 18845611 Pumo10g01411 10 18841020 18845611 ECH