Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01383 ATGATGGAGTGCAACAAAGATGAGGCAGTTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCAGAAAGGGAATATGTTGGTGCAAAGAAGTTTGCTCTCAAGGCTCAAAATCTGTATCCTGATTTGGAGGATATTACCCAGCTTTTGACAACAATTGATATTTATATATCCGCTGAGAATAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGCCCCTTTGCTGATGAGGAGACTGTCAGAAAGCAATACAGGAAGCTGGCTCTCACCCTTCACCCTGACAAAAACAAGTCTTTGGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAGACCAAGAGATTAGAATATAACCAGAAGAGGAGTTTGAATGCACCCAGTTCAAATGGTTTTTATAATTTAAAGAAGAATGTAACTTCAAATGTCAGGACTGGAAATAATAATGGTCGGGCACCTTCAGCTCCTCCACATAAAAAGGCTGAAACCTTTTGGACTATCTGTAATCGGTGCAGGACACATTATGAATATCTTAGGGTTTATTTGAATCACACCCTTTTATGTCCAAACTGTAATGAAGCTTTTGTTGCTGTAGAGAGGGGTCCACCGCCAAATGTTTTTAAGCCACCAAATTGGTCTTCTCATCAACGGCATCAGAATTCTCAACACCATACTGGAAGTAATAATACAAACTTTCAGTGGGGTTCTCACTCTAGAATGGCTGGTTTTGGTAGCACAGATGGATCAACATCTGTTGCAGCTCAAGCTGCAAGTGTTGTGCAGCAGGCAAGTGAGAAAGTAAGGAGGGAGGGTTCTTTTCACAAAGCTGAAAAACCTATGAAAAAAAGGAAGACAGATGATATTCGCATTAATGGTTATCAAGGATACATGGCAAATCATATGGCTATGGGACATGGAACGGCTGGTTTGGGCACCTTTTCTGAACCAGGAAAGGCTAACCTGGAAACAGAAAGGAATTATGGTTTTTCAGGTCTTCCTGGCAAGCATTACAGCACAAGAGAATTGTCAATGTTTGAAATACGAAACATGTTGATGGATAAGTCGCGCATTGAAATTCGTAAGAAACTTGAAGAATGGAAATCAATGGCTGAAGCTAAGGTTAACAAGGACAAAGAGAACAAGAGACAGAAAAGCACATTTAATGGCAAAACAACTGGTTCAGAGAAGCTGAGAGAGACTGCCATTAATGGTAACAGGCATCTGGACGTTGATTCTTTCCCTGTCAGATCTGATGATACAGTTAAGAACCAAACTTATGTTACAATCAATGTTCCAGACCCTGATTTTCATAATTTTGACTTGGATAGAGATGAAAATTCCTTTGCGGAGGACCAGGTCTGGGCTGCTTATGATGATGATGATGGAATGCCTCGATATTATGCTAGAATTCACAAGGTGATCTCCATAAAGCCATTTAAAATGCGGATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGCTCTGGTTTTTATAAAACCTGTGGGGATTTCAGAACTGGAAAGCATGAAATAACTGAATCATTAAATTCATTCTCTCACAAGGTTAGGTGGACAAAAGGCACGAGAGGTGTTGTTCGTATCTTTCCTGGAAAGGGGGAAGTCTGGGCTCTGTACAGAAACTGGTCTCCTGATTGGAGTGAACATACCCCAGATGAAGTGATACACAAGTATGATATGGTGGAGGTGCTTGAAGATTTCAATGAAGAACAAGGCATATTAGTTACCCCCCTTGTTAAGGTTGCTGGTTTTAGGACCGTGTTTCAAAGGCACATGGACCGTGATCAGGAGAGGAGGATTCCTAAAGAGGAAATGTTTCGATTCTCTCATCAGGTTCCTAATTACTTGCTTACCGGCCAAGAAGCTGATAATGCTCCAAAGGGTTGTCGAGAGTTGGATCCAGCCGCTACTCCTTTAGACCTCCTTCAGATAATAACAGAAGCTAATGAGACATCGGATAATGCTTAG 2034 0.4135 MMECNKDEAVRAKEIAERKFSEREYVGAKKFALKAQNLYPDLEDITQLLTTIDIYISAENKVSGEMDWYGILGVSPFADEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLNAPSSNGFYNLKKNVTSNVRTGNNNGRAPSAPPHKKAETFWTICNRCRTHYEYLRVYLNHTLLCPNCNEAFVAVERGPPPNVFKPPNWSSHQRHQNSQHHTGSNNTNFQWGSHSRMAGFGSTDGSTSVAAQAASVVQQASEKVRREGSFHKAEKPMKKRKTDDIRINGYQGYMANHMAMGHGTAGLGTFSEPGKANLETERNYGFSGLPGKHYSTRELSMFEIRNMLMDKSRIEIRKKLEEWKSMAEAKVNKDKENKRQKSTFNGKTTGSEKLRETAINGNRHLDVDSFPVRSDDTVKNQTYVTINVPDPDFHNFDLDRDENSFAEDQVWAAYDDDDGMPRYYARIHKVISIKPFKMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGKHEITESLNSFSHKVRWTKGTRGVVRIFPGKGEVWALYRNWSPDWSEHTPDEVIHKYDMVEVLEDFNEEQGILVTPLVKVAGFRTVFQRHMDRDQERRIPKEEMFRFSHQVPNYLLTGQEADNAPKGCRELDPAATPLDLLQIITEANETSDNA 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01383 677 MobiDBLite consensus disorder prediction 219 258 - -
Pumo10g01383 677 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pumo10g01383 677 Pfam DnaJ domain 67 128 IPR001623 -
Pumo10g01383 677 MobiDBLite consensus disorder prediction 383 402 - -
Pumo10g01383 677 SMART dnaj_3 66 123 IPR001623 -
Pumo10g01383 677 MobiDBLite consensus disorder prediction 217 258 - -
Pumo10g01383 677 MobiDBLite consensus disorder prediction 272 293 - -
Pumo10g01383 677 Gene3D DnaJ domain 64 171 IPR036869 -
Pumo10g01383 677 CDD DnaJ 67 120 IPR001623 -
Pumo10g01383 677 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pumo10g01383 677 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pumo10g01383 677 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pumo10g01383 677 SUPERFAMILY Chaperone J-domain 58 127 IPR036869 -
Pumo10g01383 677 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Pumo10g01383 677 PANTHER BNAC03G44070D PROTEIN 2 660 - -
Pumo10g01383 677 MobiDBLite consensus disorder prediction 276 293 - -
Pumo10g01383 677 Pfam Domain of unknown function (DUF3444) 437 643 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01383 Pumo-Chr10 18373427 18375460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01383 5 212 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.259 2.97e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01383 - - gmx:100814722 1313.13