Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01381 ATGAAATATATATTTCTTCTCCTTGTCACTTTCAAGATTATCAAGAGGAAGTTCGCACAGCTACAGGAGGCTATGGGGTTTCAAACATCTCATAGCACTAAACGGATACCGCAACCGATTTTCAAAGCAAAGGAGGACTCAATTGATGCTCATGAAAACTCATTAATTCGAAGGACCACACTGAACTTGACTGATCATACCCAAACCAATACCAAGTTTACTCTCTCTGGCTATGATTCATGGGTGGTAAGGCACCCTTCTGCATTGAACTCGTTTGATAGGTTGATGAAAGCCGCCACTGGGAAGAGGATCATCGTTTTTTTGGACTACGATGGTACCTTATCACCAATTGTAAATGACCCTGATCGCGCTTTCATGTCTGATGAGATGCGTCAAGCAGTATATGAAGTTGCTACTTATTTTGCAACAGCAATAATTAGTGGAAGAAGTAGAGATAAGGTAAAAGATTTCGTGAAGTTAAATAATTTATATTATGCTGGGAGCCATGGCATGGACATAATGGCACCATCAATGCCAGTTAGATCTTCTGACGGCAAGCATTTTGACATTGCCCGTAACACAAATGGCACTGAAGTTCCCTTTCAACCCGCGAAGAAGTTTTTGCCTGCAATTCGAGAGATAATAAGAATACTAAAGAATGAAGTAAAGGAAATAAAAGGAGCAATGGTAGAGGACAACGGATTCTGCCTCTCTGTACACTTCCGGCAGGTCCAAGAAAAGGATTATGACGTTTTGGAAGAGAAAGTGAAGTCTGTGCTGGAAAATAATCCACAATTTTGCTTAACAGAGGGTAAAAAGGTTATGGAAATAAGGCCATCTATAAAGTGGAACAAAGGAAATGCTGTAGAATATTTTCTCGACACATTAGGATTAAGCAGTTGCAATGATATCCTTCCTGTGTATATTGGCGATGATAGAACTGATGAAGATGCTTTTAAGGTCTTACAGAGTAGAGGGCAAGGTTATCCAATCATAGTGTCTTCAATTCCAAGAGAAACTAACGCTTTATACTCTTTGCGTGACCCATCTGAAGTACTAATCTTTTTGTCACGGTTGGCAAAATGGAGGAAAACCTCTTACTAA 1104 0.3976 MKYIFLLLVTFKIIKRKFAQLQEAMGFQTSHSTKRIPQPIFKAKEDSIDAHENSLIRRTTLNLTDHTQTNTKFTLSGYDSWVVRHPSALNSFDRLMKAATGKRIIVFLDYDGTLSPIVNDPDRAFMSDEMRQAVYEVATYFATAIISGRSRDKVKDFVKLNNLYYAGSHGMDIMAPSMPVRSSDGKHFDIARNTNGTEVPFQPAKKFLPAIREIIRILKNEVKEIKGAMVEDNGFCLSVHFRQVQEKDYDVLEEKVKSVLENNPQFCLTEGKKVMEIRPSIKWNKGNAVEYFLDTLGLSSCNDILPVYIGDDRTDEDAFKVLQSRGQGYPIIVSSIPRETNALYSLRDPSEVLIFLSRLAKWRKTSY 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01381 367 Gene3D - 104 189 IPR023214 -
Pumo10g01381 367 Gene3D - 193 367 IPR023214 -
Pumo10g01381 367 FunFam Trehalose 6-phosphate phosphatase 209 367 - -
Pumo10g01381 367 SUPERFAMILY HAD-like 105 363 IPR036412 -
Pumo10g01381 367 NCBIfam trehalose-phosphatase 101 361 IPR003337 GO:0003824|GO:0005992
Pumo10g01381 367 Coils Coil 242 262 - -
Pumo10g01381 367 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 50 366 IPR044651 GO:0004805|GO:0005992
Pumo10g01381 367 CDD HAD_TPP 106 352 - -
Pumo10g01381 367 Pfam Trehalose-phosphatase 107 350 IPR003337 GO:0003824|GO:0005992
Pumo10g01381 367 NCBIfam HAD-IIB family hydrolase 105 324 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01381 Pumo-Chr10 18331273 18340247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01381 102 360 Trehalose Biosynthesis Gene Families AT1G23870 26.182 3.19e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01381 K01087 - gmx:100819120 696.812