Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01373 ATGGACAACATCAACATGGGAGACCCAAAGAGCATCATACATGAGCTGCTACAAGGTTTGGAGTTGGCAAGGCAGCTCCAAGTGTATCTCCACACACCTTCTTCCTCCCAAGAAACTTGTGACCTCTTGATCCAGAAGATCATATCCACATTTGAAAAGGTACTTGAAATGGTAAATTGGAAAGGGCCTGTGCCAGTGCCAGCGGGTGAGTCATCACAACATCCCCTTGGAGCTGCAATCCGAATGTCAGACTCACCTATGAGCAGTAGTCCCCGCAGTGAAGACTCTGATAGAGATTTAAAGGACCAGGACCCCAATGCTTTCAAAAAGAGAAACACTTTGCCAAGATGGACAAAACAGATTCGAGTTACACCAGGAATGGGGGTGGAAGGGCCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAGAAAGACATCCTTGGAGCCATGTACCCGAGGGGCTATTACAGATGTACCCACAGAAATGTTCAAGGCTGCATGGCAACGAAGCAAGTGCAAAGATCCGATGAAGACCCCACAATTTTTGAAATCACTTACCGAGGAAATCACACCTGCACAATGGCCAACAACGTTGGTTCTTCATCACCAATTCCACCAAAAAACCAAGAACCAAGTTTGAACAACACAAATCCTCAGCAGCAGATCATCTTGCAAAGCCTTGAACAGCACCCAAACGATCTACTTTTGAGCCTGCAGAAAGGGTTGAGAGTACAAACAGAGAACCTAGATTCCCCTGACCAACCATTTGTTCCATTCCGTTTCCCTTTATCCACAAACATCAAAATTGAAAGCCAAGTTTTCCCTTCCCCTGTGCTTGAAAACTTCAGTTCTCCTTCTTATATGTCCCCTGCTGCATCGGGAATAAGCCACTTTTCGGTGTCTCCAAGTGCGGTGAACAGCTTTGGAGGGAACCCAAATTTGGCAAATTCTGAGTCTCAGATCAATGACATGATCCCAGCCACTACTTCAGCTCCAAACTCATCAACCGTTGGTTTGGAGTATCCTTTTGACCAGTTTGAATTTGATGGCCAGAACTTCACATTCGATAACCCACCATTTTTCTCTTGA 1092 0.4542 MDNINMGDPKSIIHELLQGLELARQLQVYLHTPSSSQETCDLLIQKIISTFEKVLEMVNWKGPVPVPAGESSQHPLGAAIRMSDSPMSSSPRSEDSDRDLKDQDPNAFKKRNTLPRWTKQIRVTPGMGVEGPLDDGYSWRKYGQKDILGAMYPRGYYRCTHRNVQGCMATKQVQRSDEDPTIFEITYRGNHTCTMANNVGSSSPIPPKNQEPSLNNTNPQQQIILQSLEQHPNDLLLSLQKGLRVQTENLDSPDQPFVPFRFPLSTNIKIESQVFPSPVLENFSSPSYMSPAASGISHFSVSPSAVNSFGGNPNLANSESQINDMIPATTSAPNSSTVGLEYPFDQFEFDGQNFTFDNPPFFS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01373 363 Pfam WRKY DNA -binding domain 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g01373 363 MobiDBLite consensus disorder prediction 80 114 - -
Pumo10g01373 363 ProSiteProfiles WRKY domain profile. 128 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g01373 363 FunFam WRKY transcription factor 53 119 196 - -
Pumo10g01373 363 Gene3D WRKY domain 126 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo10g01373 363 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 281 IPR044810 GO:0003700
Pumo10g01373 363 SMART WRKY_cls 133 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g01373 363 MobiDBLite consensus disorder prediction 91 109 - -
Pumo10g01373 363 SUPERFAMILY WRKY DNA-binding domain 132 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01373 Pumo-Chr10 18229232 18231987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01373 10 231 WRKY Transcription Factor Family AT5G24110 42.411 2.83e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo10g01373 WRKY 3.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01373 - - gmx:100776906 635.565