Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01350 ATGAAGGAACTGAGCGTGGTTGCAGCCATGTTAACGACGGGGTTGTTGGACGCCATTGTCAACACTGTAAGCAAAGCAGCCATGAAGAAGGGCATGAATGACTTTGTATTCGTCATGTACTCCAATGCCTTCGCTGCCTGCTTCATCTTTCTCTTAACCTTAATCTTTTATAGGAAAAGAACACTTCCCCCACTCTCCTATAACATTGTTGGCTTGTCATTTGTTGTTGGCATGTTCAGTTGCAGTAATCAACTACTCAAGTTTTTTGGGATAGGTTATAGCTCTCCTACTTTGGCCTCAGCACTGTCTGATTTGACCCCAGCCTTTACCTTCATATTTGCCATCATTTTCAGGATGGAAAAATTGGACTGGAAAACTAACAGCACTTGGGCAAAGACTACTGGCACATTGGTATCAATTGCTGGGGCCTTGATAATGTCTCTGTACAAAGGCCAGGCAGTCATAAATAATCATCCCCCTTTAAAATTGTTCCCTCAAAAACTTGCCTCATCTACGCAATTTGACTGGGCATTTGGGGCAGTGTTGCTTGTGGCTCATAGCTGTTTTCTCTCAATAAACTTTATACTTGTGACACGGATAGTAAGAGAATACCCTGCAGAGCTGTTGGTGGTACTCATTCGCATTATATTAACCTCTATACTATCTGTTCCTGCTGCACTGATTTCAGAAAAGGATCTAAAAGCTTTTAGACTGGGATTTAATATGGAGCTAATAGCTATTGGATGTGCAGCAATTTTCGGCTTATCCTTTGGAGGTTTTATCTATACCTGGGCCATGGGGAAGAGGGGTCCTGTCTATGTTGCAATGTTTAAGCCACTCGAAATAGTCTTTGCATTCATCTTGGGGATTACTTTTCTTGGGGACTCTCTCTATATTGGAAGGAAAAGAACACTTCCCCCACTCTCCTATAACATCGTTGGCCTATTATTCGTTGTTGGCTTGCTCAGTTGCAGTAATCAGATGCTCAAGTTTTTCGGCATAGGTTACAGCTCTCCTACTTTGGCCTCAGCACTGTCTAATTTGGTCCCTGCCTTTACCTTCATACTTGCCATCATCTTCAGGATGGAAAAATTAGATTGGAAAGCTGATAGCACTCGGGCCAAGTCCATTGGCACATTGGTGACAATCGCTGGGGCCTTGATAATGTCTCTGTACAAAGGCCAGGCAATCATAAATAATCATCCACTTCCTAAGTTGTTCCCTCAAAAACTTGTCTCATCTATGCAATTTGACTGGGTATTTGGAGCAGTGTTGCTTGCAGCTCATAGCTGTTTTCTCTCAATAAACTACTTACTTTTGACACGAATAGTAAGAGAATACCCTGCAGAGTTGGTGGTGGTACTCATTCGCATTACATTAACCTCTATACTATCTGTTCCAGCTGCACTGATTTCAGAAAAGGATCTAAAAGCTTTGAGACTGGGATTTAATATGGAGCTGATGGCTATTGGATGTTCAGCAATTTTTGTCTTATCCTTTCGAGGTGTTATCCATATATGGGCCATGGGGAAGAGGGGCCCTGTCTATGTTGCAATGTTTAAGCCACTTGAAATAATCTTCGCAGTCATCTTGGGGATTACTTTTCTTGGGGACTCTCTCTATATTGGAAGTGTGATCGGAGCAGCCATAGTAGTTACTGGTTTTTATGCTGTTATTTGGGGGAAAACTCAAGAGAAGGTGGAGGAAGACTGTGCAGTCTATAGCTCTGAATCATACGCTACTGAGGTCCCTCTTTTGCAGAACTAG 1767 0.425 MKELSVVAAMLTTGLLDAIVNTVSKAAMKKGMNDFVFVMYSNAFAACFIFLLTLIFYRKRTLPPLSYNIVGLSFVVGMFSCSNQLLKFFGIGYSSPTLASALSDLTPAFTFIFAIIFRMEKLDWKTNSTWAKTTGTLVSIAGALIMSLYKGQAVINNHPPLKLFPQKLASSTQFDWAFGAVLLVAHSCFLSINFILVTRIVREYPAELLVVLIRIILTSILSVPAALISEKDLKAFRLGFNMELIAIGCAAIFGLSFGGFIYTWAMGKRGPVYVAMFKPLEIVFAFILGITFLGDSLYIGRKRTLPPLSYNIVGLLFVVGLLSCSNQMLKFFGIGYSSPTLASALSNLVPAFTFILAIIFRMEKLDWKADSTRAKSIGTLVTIAGALIMSLYKGQAIINNHPLPKLFPQKLVSSMQFDWVFGAVLLAAHSCFLSINYLLLTRIVREYPAELVVVLIRITLTSILSVPAALISEKDLKALRLGFNMELMAIGCSAIFVLSFRGVIHIWAMGKRGPVYVAMFKPLEIIFAVILGITFLGDSLYIGSVIGAAIVVTGFYAVIWGKTQEKVEEDCAVYSSESYATEVPLLQN 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01350 588 Pfam EamA-like transporter family 8 147 IPR000620 GO:0016020
Pumo10g01350 588 Pfam EamA-like transporter family 178 298 IPR000620 GO:0016020
Pumo10g01350 588 Pfam EamA-like transporter family 421 559 IPR000620 GO:0016020
Pumo10g01350 588 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 150 - -
Pumo10g01350 588 SUPERFAMILY Multidrug resistance efflux transporter EmrE 484 563 - -
Pumo10g01350 588 PANTHER WAT1-RELATED PROTEIN 6 299 IPR030184 GO:0016020|GO:0022857
Pumo10g01350 588 SUPERFAMILY Multidrug resistance efflux transporter EmrE 303 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01350 Pumo-Chr10 17910200 17926952 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01350 301 588 Nodulin-like Gene Family AT3G28050 41.667 3.07e-69 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01350 - - gmx:100500595 495.738