Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01349 ATGGGGAAGCTGACTCTTCCGTTTGTGGGAATGATTATGGCGGAGTTTGCTCAGGTTGGGTTAATAATATTGAGCAAACAAGCCATGGCACAAGGAATGACCAATTTCATCTTCATCTTCTATTCCAACTCAATCGCTGCTCTCCTCCTTCTTCCCACTTCATTCCTTATACACAGAGTTGAACGTCCTCCAATCACGTTTGCCACCCTTTGTGGATTCTTCTTACTTGCGCTACTCGGTTATTTGGCGCAGGCTTTTGGGTACGCTGGGATTTACTACGGCTCAGCTACACTCAGCACGTCCATGCTCAACCTTGTTCCTGGTTTTACTTTCATACTTGCCGTTCTTTTTAGAATGGAACAATTAGATTGGAGAAAATTTAGCAGCCTAGCTAAATCGTTGGGAACAATAGTATCCATTGCTGGTGCATTTATTGTGACTTTGTACAAGGGCCCTGCACTTTTGATGGGAGTATCATCTGCAAACTCATCTCAGCAGCCACTTCTCTCAGAAGATTCTAATTGGATACTCGCAGGATTATTTCTTGCAGCTGATTGTATAATGGCTTCAGCATATATTATTGTACAGGCTTCTATTCTTAAGAAATATCCAGCAGAGTTGATTGTTGTATTCTTTTATTGTTTCTTTGTGGCCATTCAATCTGCTGTGACCTGTTTGGTTGTGGAAAGAGACATCGGTGCTTGGAGCTTGGAACCTAAGTTAAAATTGCTTGCAGTTTTATACTCGGGAATTATTGGCTCTGCATTTCAAGTTGGTATTTTTTCTTGGTGTTTGCACCAGACAGGACCAGTTTTTGTTTCCATGTTCAAGCCCTTAGGAATAGTCATATCAGTGGTTTTCGGTGTTCTCTTCCTCGGGGATGCATTCTATCTTGGAAGTCTGATTGGTGCTACTGTGATTGTTGTTGGGTTTTATTCTGTATTATGGGGGAAAGCCAAAGATATTGAAGATGCTGGCGTGAGAAGCTTGGATTCAAGGGGCAAACAGACCCCCCTTTTAGAGGAAAACAGCCATGAAGACATACAAAGGCATTAG 1056 0.4223 MGKLTLPFVGMIMAEFAQVGLIILSKQAMAQGMTNFIFIFYSNSIAALLLLPTSFLIHRVERPPITFATLCGFFLLALLGYLAQAFGYAGIYYGSATLSTSMLNLVPGFTFILAVLFRMEQLDWRKFSSLAKSLGTIVSIAGAFIVTLYKGPALLMGVSSANSSQQPLLSEDSNWILAGLFLAADCIMASAYIIVQASILKKYPAELIVVFFYCFFVAIQSAVTCLVVERDIGAWSLEPKLKLLAVLYSGIIGSAFQVGIFSWCLHQTGPVFVSMFKPLGIVISVVFGVLFLGDAFYLGSLIGATVIVVGFYSVLWGKAKDIEDAGVRSLDSRGKQTPLLEENSHEDIQRH 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01349 351 PANTHER WAT1-RELATED PROTEIN 7 322 IPR030184 GO:0016020|GO:0022857
Pumo10g01349 351 Pfam EamA-like transporter family 180 315 IPR000620 GO:0016020
Pumo10g01349 351 Pfam EamA-like transporter family 12 146 IPR000620 GO:0016020
Pumo10g01349 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 149 - -
Pumo10g01349 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01349 Pumo-Chr10 17894024 17897086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01349 3 347 Nodulin-like Gene Family AT3G28050 43.611 2.39e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01349 - - gmx:100804932 605.905