Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01333 ATGGTGCCTCCGGGGCCACCCACTCCCATTGGTGGTGCCCAGTCTGTTTCACCTTCTCTTTTAAGATCGAATTCAGGATTGCTAGGAGCTCAAGGGGGTCCCATGCCGCCGCAGACGTCTTTCCCTTCCCTCATCTCACCACGCACTCAGTTCAACAACATGAACATTCTAGGAAATATGTCCAATGTGACTTCCATACTGAATCAGTCTTTCCCAAATGGAGTTCCAAATCCCGGGCTCTCTGGTCCAGGAAGTAGCCAGCGCGGAGCAATTGATACTGGAGCTGAAACAGATCCACTCTCCAGTGTTGGCAATGGAATGAGCTTCAATAATTCTTCATCCACGTTTGTACAGTCAAGTATAGTGAATGCTGCTTCCTCTGGTCAAGGTCAGGGTCAACAATTTTCAAACCCTTCCAGTAACCAGCTGTTGCCAGATCAACAGCATTCCCAACAGCTTGAACCTCAAAATTTCCAACACGGTCAGCAGTCAATGCAACAGTTCTCTGCTCCTCTGAATACACAGCAGCCGCCGCAGCCGCAGCAGCATTTTCAATCAATTCGAGGAGGGATAGGTGGTATGGGACCAGTAAAGCTGGAGCCCCAGGTGAGCAGCGATCAACTTGGACAGCAGCAGCAGCAGCAGCAGTTGCAATCGTTGAGGAATCTTGCTCCAGTGAAGTTGGAACCACAACAAATGCAGACAATGAGAACTCTGGGACCTGTTAAAATGGAGCCTCAGCATTCTGATCAACCATTATTTTTGCAGCAGCAACAGCAGCAGCAACAACAGCAACAACAACAACAGTTTCTCCACATGTCAAGTCAATCGTCTCAGGCCGCTGCTGCCCAGATAAATCTTTTGCGCCATCACAGGCTTTTACAGTTTCAACAACACCAGCAGCAGCAACAACTATTGAAGGCAATGCCTCAACAACGGTCCCAACTACCACAGCCGCAATTTCAACAGCAGAATATGCCTATGAGGTCTCCTGTGAAGCCAGCATATGAACCAGGGATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAACAATATCGAGTTCTGGAGAAAGTTTGTTGCTGAGTATTTTGCTCCTAATGCCAAGAAAAAATGGTGTGTTTCAATGTATGGAAGTGGAAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGCGAAATATGTAATCGCAAGCCTGGCCGTGGATTTGAAGCAACTGTCGAGGTTCTTCCCCGGCTTTTCAAGATAAAGTACGAAAGTGGTACTTTGGAAGAACTACTTTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGTCAGATTGTTCTAGATTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCGGACCTGAAGATATGTTCTTGGGAATTTTGTGCTCGGCGCCATGAGGAGCTCATACCCAGGAGATTGTTAATACCGCAGGTTAGTCAGCTTGGAGTGGTTGCTCAAAAATACCAGGCTTTTACTCAAAATGCAACACCCAATGTATCTGTTCCAGAATTACAAAATAATTGCAATATGTTTGTTGCATCAGCCCGTCAGTTGGCTAAAGCCTTAGAAGTACCATTGGTTAATGATTTAGGATATACAAAGCGATATGTGCGCTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGAAACTGAGACTGGACCTATGGAGAGCTTAGCAAAATTCCCTCGGAGAACGAGTGGTTCATCTGGACCTCGTAGTCAAGCACAACAACATGAAGAACAATTACAGCAGCAGCAGCAACAACAAATGGTGGCCCATAACTCAAATGGTGATCAAAACTCAGTACAAGCTGCTGCCATGCAAATTGCTTCTAGCAATGGTATGGTTAGTGTAAATAACTCTGTCAACCCAGCATCCTCATCAACCACCACAAGCACTATTGTTGGACTTCTTCACCAGAACTCTATGAATTCTAGACAACAAAATTCAATGAACAATGCAAGCAGTCCATATGGAGGTAGTTCTGTTCAGATTCCATCCCCAGGTTCCTCCAGTACAGTGCCACAGGCCCAGCCAAACTCATCCCCTTTTCAATCTCCAACACCATCCTCTTCTAACAACCCCCCTCAAACATCTCACCCTGCTTTAACATCTGCCAATCGCATGAGTACAACAAACTCACCAGCTAATATTTCCATGCAACAGCAACAGCCATCTATTTCTGGTGAACCTGACCCTAGTGATGCTCAAAGCTCAGTCCATAAAATCATACACGAGATGATGATGTCCTCCCAGATTAACGGCACAGGTGGAATGGTCGGTGTTGGTTCTCTTGGAAATGACGTGAAGAATATAAATGGTATTTTGCCAGTGAGTGCCAATACAGGGCTCAATGGTGGCAACGGCTTGGTGGGTAATGGCGCCATGAACAGTAATCATGGCATTGGGGTTGGTAACTATGGCACAATAGGTCTTGGTCAATCTGCTATGCCGAATGGAATCAGAGCTGCTATGGTAAATAATTCAATCATGAATGGAAGGGGAGGAATGGCGTCTCTTGCCCGGGATCAAGCTATGAATCATCAACAGGATCTGTCAAACCAACTACTTAGTGGGCTAGGGGCAGTAAGTGGTTTTAATAATCTTCAATTTGATTGGAAACCTTCTCCTTGA 2754 0.4528 MVPPGPPTPIGGAQSVSPSLLRSNSGLLGAQGGPMPPQTSFPSLISPRTQFNNMNILGNMSNVTSILNQSFPNGVPNPGLSGPGSSQRGAIDTGAETDPLSSVGNGMSFNNSSSTFVQSSIVNAASSGQGQGQQFSNPSSNQLLPDQQHSQQLEPQNFQHGQQSMQQFSAPLNTQQPPQPQQHFQSIRGGIGGMGPVKLEPQVSSDQLGQQQQQQQLQSLRNLAPVKLEPQQMQTMRTLGPVKMEPQHSDQPLFLQQQQQQQQQQQQQQFLHMSSQSSQAAAAQINLLRHHRLLQFQQHQQQQQLLKAMPQQRSQLPQPQFQQQNMPMRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGVVAQKYQAFTQNATPNVSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETETGPMESLAKFPRRTSGSSGPRSQAQQHEEQLQQQQQQQMVAHNSNGDQNSVQAAAMQIASSNGMVSVNNSVNPASSSTTTSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSSTVPQAQPNSSPFQSPTPSSSNNPPQTSHPALTSANRMSTTNSPANISMQQQQPSISGEPDPSDAQSSVHKIIHEMMMSSQINGTGGMVGVGSLGNDVKNINGILPVSANTGLNGGNGLVGNGAMNSNHGIGVGNYGTIGLGQSAMPNGIRAAMVNNSIMNGRGGMASLARDQAMNHQQDLSNQLLSGLGAVSGFNNLQFDWKPSP 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01333 917 MobiDBLite consensus disorder prediction 591 641 - -
Pumo10g01333 917 PANTHER LIM DOMAIN-BINDING PROTEIN 207 906 IPR029005 -
Pumo10g01333 917 MobiDBLite consensus disorder prediction 685 775 - -
Pumo10g01333 917 MobiDBLite consensus disorder prediction 243 275 - -
Pumo10g01333 917 MobiDBLite consensus disorder prediction 125 216 - -
Pumo10g01333 917 MobiDBLite consensus disorder prediction 685 779 - -
Pumo10g01333 917 Pfam LIM-domain binding protein 344 598 IPR029005 -
Pumo10g01333 917 MobiDBLite consensus disorder prediction 74 107 - -
Pumo10g01333 917 MobiDBLite consensus disorder prediction 125 186 - -
Pumo10g01333 917 MobiDBLite consensus disorder prediction 1 43 - -
Pumo10g01333 917 MobiDBLite consensus disorder prediction 250 275 - -
Pumo10g01333 917 MobiDBLite consensus disorder prediction 602 641 - -
Pumo10g01333 917 MobiDBLite consensus disorder prediction 304 329 - -
Pumo10g01333 917 MobiDBLite consensus disorder prediction 12 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01333 Pumo-Chr10 17672625 17681115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01333 1 913 C2H2 Transcription Factor Family AT1G43850 60.274 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01333 - - gmx:100799771 1490.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01333 10 17672625 17681115 Pumo10g01333 10 17672625 17681115 ECH