Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01331 ATGTCATTAGTTAGGTCTGCTGATCTAGCTCCTACATCATATGAAAATGATAAGCTCTTCTCACTGAAGGGAACTGATGTTAGACCAGGCCTGTCCTCCCAAATATTTGGTCCTGATAAGCATAGGAGCATGTACATGACAGATACTTACTCCAGTGAGAGTTATGAGAAGTACTTCCATGACTCACAAACAGAAGAACTGATAGAACCATCTAGTTCCAGCATTTCTGGAAGTTCAATTCACCCTGATGTTGCCTCTTCTTACCAGATCAGAGCTAGTTCAGGAGCTTCTATGGTTGCCAACAATCCATTTGATTCTCCTTTCATGTCTACAAGGCATCATGATGCTTATCAGTCAAACTCTGGATCAGATTTGATGGAGAATGGAAGCCTGGATTCACGCAACGATGATGGCCTAATGAGATTAAAACTACAAGCATTGGAGAGGGCACTGCTTGATGATAGTGATGCTGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGACATATTTGAGGCTGTGCAAAGCATGGAAATTGATCCTGACATTGCTGAGTGGGCTGATTCCATGCAGAATATGCTGCTCCATGATTCACCAAAGGAGTACTCTTCTTCAGATTCCAATGTTAGCAGCACCAGCAGCACCAAAGAAATATCACAAACTTCTAGGACCCCCAAGCAGCTGCTTTATGAATGTGCTATTGCACTTTCAGAAGGAAATGAAGAGGAAGGGTCATCTATGATAAACAATCTCCGGCAGATGGTCTCAATTCAAGGAGAGCCTTCTCAAAGAATTGCAGCTTATATGGTTGAGGGACTTGCAGCTCGCCTGGCTGAATCAGGCAAAAGTATTTACAAAGCTCTGAGATGCAAGGAACCTCCTTCTTCAGACCGTCTAGCAGCCATGCAGATACTGTTTGAGGTTTGCCCATGTTTCAAATTTGGGTTTATTGCTGCTAACAATGCAATTACAGAAGCAGTGAAAGATGACATGAAGATTCATATAATAGACTTTGACATCAATCAAGGAAGCCAGTACATAAATCTAATCCAAACACTTGCTTCAAGGTCAAGTAAGCCACCCCATGTTAGGTTGACTGGAGTTGATGATCCTGAATCTGTGCAGCGTTCTGTTGGGGGCCTACAGATCATAGGACAAAGACTAGAAAAACTGGCAGAGGCACTTGGCTTGCCATTCGAGTTTCGAGCAGTGGCATCAAGGACTTCCATTGTCACCCCATCGATGCTCAACTGTAGTCCTGATGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCCTGATGAGAGTGTTTCAACAGTAAACGAACGGGACCAACTTCTTCGCTTGGTGAAGAGCTTGAATCCAAAGCTTGTGACAGTTGTGGAGCAAGATGTGAACACAAACACCACCCCCTTCTTACCTAGATTTGTTGAGGCCTACAATTATTACTCTGCTGTGTTTGAGTCACTTGATGTTACTCTTCCTAGAGAAAGCCAGGACAGGATGAATGTTGAAAGGCAATGCTTAGCAAGGGACATTGTCAATGTTGTTGCGTGCGAGGGCGAGGATAGGATAGAACGGTATGAAGTTGCTGGAAAATGGAGAGCAAGGATGACAATGGCTGGCTTCACTTCATCCCCAATGAGCACAAATGTGAATGATGAAATCCGAAAACTCATTAAGGTGGTGTATTGCGATAGGTACAAGATTAAGGAGGAAATGGGTGCACTTCATTTTGGTTGGGAAGACAAAAACTTGATCGTTGCTTCAGCATGGAAGTTACCAAGATAA 1803 0.4382 MSLVRSADLAPTSYENDKLFSLKGTDVRPGLSSQIFGPDKHRSMYMTDTYSSESYEKYFHDSQTEELIEPSSSSISGSSIHPDVASSYQIRASSGASMVANNPFDSPFMSTRHHDAYQSNSGSDLMENGSLDSRNDDGLMRLKLQALERALLDDSDAEEEEEEEEEEEEDIFEAVQSMEIDPDIAEWADSMQNMLLHDSPKEYSSSDSNVSSTSSTKEISQTSRTPKQLLYECAIALSEGNEEEGSSMINNLRQMVSIQGEPSQRIAAYMVEGLAARLAESGKSIYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFIAANNAITEAVKDDMKIHIIDFDINQGSQYINLIQTLASRSSKPPHVRLTGVDDPESVQRSVGGLQIIGQRLEKLAEALGLPFEFRAVASRTSIVTPSMLNCSPDEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLNPKLVTVVEQDVNTNTTPFLPRFVEAYNYYSAVFESLDVTLPRESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFTSSPMSTNVNDEIRKLIKVVYCDRYKIKEEMGALHFGWEDKNLIVASAWKLPR 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01331 600 MobiDBLite consensus disorder prediction 198 223 - -
Pumo10g01331 600 ProSiteProfiles GRAS family profile. 217 597 IPR005202 -
Pumo10g01331 600 Coils Coil 144 177 - -
Pumo10g01331 600 MobiDBLite consensus disorder prediction 153 171 - -
Pumo10g01331 600 Pfam GRAS domain family 227 597 IPR005202 -
Pumo10g01331 600 MobiDBLite consensus disorder prediction 151 171 - -
Pumo10g01331 600 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 198 592 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01331 Pumo-Chr10 17663160 17667349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01331 1 597 GRAS Transcription Factor Family AT1G21450 61.231 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo10g01331 GRAS 1.3e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01331 - - gmx:100798897 1065.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01331 10 17663160 17667349 Pumo10g01331 10 17663160 17667349 ECH
Pumo9g01096 9 30366390 30370792 Pumo10g01331 10 17663160 17667349 PCT