Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01298 ATGCCTCGGCGGCGGCGGTGCACGGCGGCGGCAGTGGACAGCAGCGTGAGCGACTTGGAGGAGGACTTCATCATGCGGTGCCTCTCCTGCGAGGAGGAGTACGACATGGACGACTCCGGAACCTGCAGGGAGTGCTACCAAGAGGCCAACGAGGCCGAAGAGGAGCTCCGCCGCGAGATCGAAGACCTCAAATCCAAAGTCTCCTTTCTCACTCTCCCCTCTCCCAATCTCAGTGCTTCCACCGCCGATATCGTCCTCGTTCCTGTCGATGACTCAGACGCGGCTCCCATTCCCGCTCACAAGCACCTTCTGGTTAGTCGCTCTCCTGTTTTCAAAGCAATGCTTGAGAATGATATGACAGAAAGGCGAAGTGGCACCATCAAGATTTCTGACGTATCATATGATACCCTTCGTGCTTTTGTTAACTATTTATACACTGCTGAAGCGTCCCTTGATAACGAATTGGCCTGTAACCTGTTGGTTTTAGGAGAAAAGTATCAAGTGAAGCATCTCAAGACATACTGTGAAAAGTATTTGATAGCCAAAATGAATTGGAATAAAGCTATTTCTAACTATGCTTTTGCATATCAATACAATTGCAAACAATTACGAAGTGCGTCCTTGGCAGTGATCTTGGACAACATGGACTTGCTCACTCAAAATGAATATTATGCGGAGCTGGTGGACACTAATCCTCGTCTTGTTGTGGAAATATATGAAACATATATTGGCAAGCAATTAAATACTGCAGGCGCATTTTAG 762 0.4777 MPRRRRCTAAAVDSSVSDLEEDFIMRCLSCEEEYDMDDSGTCRECYQEANEAEEELRREIEDLKSKVSFLTLPSPNLSASTADIVLVPVDDSDAAPIPAHKHLLVSRSPVFKAMLENDMTERRSGTIKISDVSYDTLRAFVNYLYTAEASLDNELACNLLVLGEKYQVKHLKTYCEKYLIAKMNWNKAISNYAFAYQYNCKQLRSASLAVILDNMDLLTQNEYYAELVDTNPRLVVEIYETYIGKQLNTAGAF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01298 253 Gene3D Potassium Channel Kv1.1; Chain A 51 184 IPR011333 -
Pumo10g01298 253 ProSiteProfiles BTB domain profile. 82 153 IPR000210 GO:0005515
Pumo10g01298 253 SMART BTB_4 82 183 IPR000210 GO:0005515
Pumo10g01298 253 CDD BTB_POZ_ZBTB_KLHL-like 82 166 - -
Pumo10g01298 253 PANTHER SPECKLE-TYPE POZ PROTEIN 94 248 - -
Pumo10g01298 253 SUPERFAMILY POZ domain 82 180 IPR011333 -
Pumo10g01298 253 Coils Coil 42 66 - -
Pumo10g01298 253 Pfam BTB/POZ domain 80 181 IPR000210 GO:0005515
Pumo10g01298 253 Gene3D - 185 252 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pumo10g01298 BTB 3.5e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01298 K10523 - gmx:100794118 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01298 10 17032557 17042585 Pumo10g01298 10 17032557 17042585 ECH