Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01292 ATGCAATTGTACCATCATCCATTTGATTTGGACTCCCAGAAGGTGAGACTTGCGTTGGAAGAGAAAGGCATTGATTATACATCTTACCATGTCAATCCCATAACTGGCAAGAACTTGGATTCTTCATTCTTCAACATTAATCCCGGTGGAAGACTCCCAGTTTTCCAGAATGGCTCTCACATCCTTTACAAGACTATTGATATAATCCAGTACATAGAAAGAATTGCTGTGTTCTCCTCAGGGTCTGAGAATATCAGTACCAGTAGCAAGGAAGTCATTGAATGGATGCAGAAGATACAAGAGTGGGATCCTAAGTATTTTTCCCTTTCCCATATACCAGATAAATACAGGGTATATGTTTCCAAGTTCTTAAGGCGAGTGGTGATTGCTCGAATGTCCGAGTCCCCAGAATTAGCAGGTGCTTACCATAGGAAGTTAAAAGAAGCCTATCAGACTGAAGAGAAATTGAAAGAGGCAGATGTATTGAGAAGGAGCAAGGAGCATTTGATTAGGCTGCTTGATGAAGCTGAGAGGCAGCTGAGTGAAACACTTTATTTAGCAGGTGAAGAGTTTACCATGGCTGATGTGATGCTCATTCCAGTGTTGGCTCGTTTAGTACTCTTGGATTTGGAAAATGAGTACATAACTGGCAGGCCAAACATTGCTGAGTATTGGGTTTTTGTTCAGCAAAGGCCTAGTTATAGGAAGGTGATTGGTAGGCATTTTGATGGTTGGAAAAAGCACAAGACATTGTTAAAAACTTGGTGCTTTGTTCGTATTAGAAGTTTGCTGAAGAGGTACTAG 804 0.4104 MQLYHHPFDLDSQKVRLALEEKGIDYTSYHVNPITGKNLDSSFFNINPGGRLPVFQNGSHILYKTIDIIQYIERIAVFSSGSENISTSSKEVIEWMQKIQEWDPKYFSLSHIPDKYRVYVSKFLRRVVIARMSESPELAGAYHRKLKEAYQTEEKLKEADVLRRSKEHLIRLLDEAERQLSETLYLAGEEFTMADVMLIPVLARLVLLDLENEYITGRPNIAEYWVFVQQRPSYRKVIGRHFDGWKKHKTLLKTWCFVRIRSLLKRY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01292 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Pumo10g01292 267 CDD GST_N_family 1 73 - -
Pumo10g01292 267 Pfam Glutathione S-transferase, C-terminal domain 161 224 - -
Pumo10g01292 267 Gene3D Glutaredoxin 1 75 - -
Pumo10g01292 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 114 252 IPR010987 -
Pumo10g01292 267 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Pumo10g01292 267 CDD GST_C_family 148 225 - -
Pumo10g01292 267 Gene3D - 132 238 - -
Pumo10g01292 267 Coils Coil 159 179 - -
Pumo10g01292 267 SUPERFAMILY GST C-terminal domain-like 157 239 IPR036282 -
Pumo10g01292 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Pumo10g01292 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01292 Pumo-Chr10 16944871 16947559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01292 1 267 Glutathione S-transferase Gene Family AT1G77290 69.663 4.10e-143 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01292 K22077 - gmx:100792543 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01292 10 16944871 16947559 Pumo10g01292 10 16944871 16947559 ECH
Pumo9g01149 9 33460732 33463467 Pumo10g01292 10 16944871 16947559 PCT