Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01291 ATGATTGAGATGGGGTCGTGTGGGAGATCTGCTACCATTGATGATCCCTCAGGAGGGGCTGTTATTGAGCAGCATTTGTGCTCAGAGGTTCAGGAGCAGGTGGTTTCTGTGCAGGAGTCTTGTTTAGAAGAGGCTTGCAATGTGGTGGACTCTAATGTTGAGCTATCCACTGTGGCTGATGGTTGTGTGGGAGAGGACCGTGTGGGTTCTGAAGGATGTGTCAATGCTGCCGAGGGGTCCGGAGAGGGTTTGGGTTTGGGTAGTGAATGTGAAAATGCTAATTTGTTGCCACTGAAGAAAGCTGCTGAAGATGATTGTCAGAATTGTTTGGGGGTTTCTTGTGGGAGCATTGAAGTTCCCTGTGCAAACAGCGGCTCAGAGGGGAATTTTCAGGATGAGGGCAACTTTGATCTGCCGTCACAGTCCTTGACTGCAGATGATTCACAGAGGCATTGTGCTCAACAGGATGAGCAGAAGGATGATAAGTCAGGGTCCTTAACTACAGATGATTCGCAGAGGCATTGTGCTCAACAGGATGAGCAGAAGGATGATAAGTCAGGGTCCTTAATTACAGATGATTTGCAGAGGCATTGTGCTCAACAGGATGAGCAGAAGGATGATAAGTCAGGGTCCTTAATTACAAATGATTCGCAGAGGCATTGTGCTCAACAGGATGAGCAGAAGGGTGATAAGAGCGATGTATTACCTGCAGCAGGAGATGATTCGGCTGTCATGGAAGGCAAAAACGATGACACTGGTGTTCTTGCTGATGCTTTCAGTCATGTACTTGATTTCAGGGATTGCAAAGTGTCTTTGGAATCAGAATCCATGGCTGACTTGCTAGTTGATTGCAACCAGCAAAGTGAGCAGGAGGAAATTATGAGAAATGCAGATCCCTTGTTGAATGTAGTGGAAAAATGTGACACTCTACTTGGGAAGGAAACTGATGCTTGCAGGCAGACATCTCCTACTCCAGCTACGGAAGTGCCATCCGGGGCACCATCAGGTGCATTATGTACAGATACAGAAGTAGAGAGCACAAGTGATCAGCCATGTGATCAGAAAGATGGTGAGGATCAGAATAGTACTTGTGAAGAAAAGGTTAAAGCTTTTGTTGATGAAGAAATCATCAACATTAATTCATGTGTAAAAATATCATCCTCTCCATGTTGCCATGGGACTGTTGGGAGCTCATCTGTAGTTGATTTTCCTTGTGAGCCTGCCCTGTTGGATCTAGGGTGTGAAATGAAGAATGGTATGCTGCAAATAGAAGATGATTTATGTAAATTGAAGGACTGTTCCTCTGAGGAAACCACCAACTCTATCTTTAGAAAACCGTTTTCTCCAGAATCAGGTCTGCCCTCTGTTGCTTTAATTACTGACTGCTCTTCAAAGGATGTTCCTGATCTCCATTGTAAGGGTGATGATTTTTCCATTAATAATAATAATGCTGTGGACTATCCAGGACAGATGGATAATGATGGAACAGAAGCTGTTGAAGTTGATTGTATCACTGAAAGCATTCCGTTACCTTCTCAAAGGAATAGTCAAAGAACTAAATTTGGCCGTAAGACACAAACCAAAAAGGCTTCAAGAAAATGCAAGAACAAAACCAAGGTGACACATCCAAATGGGGGTATGAAGCTAAACTTAGAGGCTGCTAGAAAGAAAAGAAGTTGTTTCTCCAAACCAGCTCGTTCTTCTATCTGGGGATTGATTGGGAATATTGAACAGTTTTTTGAGCAAGATAATGAGCTTGGAGTTGGTGAAGCTCTGTGCCAAGAAATGGGGAAGGCTAGAAGCAAGCGTCAAAGTGGGAAAGCAGTTAAGAATGGTGCAAGTACTACCTCATTGAGTTCAGTACAGAAGTGTTCTGCTTCAACTACTCGTTTTCGTCTGAAGATCAAAATTGGAAAAGATGTTGATTTAAGTTGCTCAAATGTCTTGATTCCAGAGTCTGTTGATGGCTTGGCTTCTGCTTCCTACTTGGGGTCTGGTTCAGGTTGTCAGAAAGTAGCCAGCAATGCTGAAGATAAAATTTCTGAAGCGGTGGCTTTGGGCAATTCAGAATCTTTCAACAATGACCTGGACAAGGATGGTCTTGTTCTAAATGAACAAGTTGCAAATAACTCCTTAGAAACTACTGAAATAACAGAGAAGTCATATGGGGTTGCAGAGGAACCTTGTCTTGCAGGTCCTCCAGAGAAGGTGGTTGAAGCATTGATTGAACCTATCAATAACAAGGGTATGGATCCTGGAACCTCACCTGATTCTGAAGTTATCAATTCAATTCCCGAAGTCCAGGTTGGAGAAAGACATCAAGAAGATCATGCTGTTTTAGGTTCTTCTAAAGAATTAAATTCTAAATTGGATGTTACCATCAGTAAGAGAGGGAAGAAGAAAGAGAAAATTATATGTTCAAGTAATTGTATCACTGAAGATGGATCACAAGGTCCACCTGGGAATAGTAGAGCTAAGCATTCAAAGAATTGCAGACGTAAGAAAAATTGCAGGGATGCGGTTAGCTCTTTGGAATTGCCCACTTTCACTGAGATAAGCAAATCTGTGAGCAGTAAAGACTTGTCCCCAGAATCATTGCCCCTTTCCGGAGAGACTGAACTTGGAGGCTCCACTGAGGCTTTGAAAGTTAAAGATCATATGGACATTAAGACAAGTAGCAAACCATCTGTTGACCATGGATGTTCAGAATCCCAGGTTTCTGAGAATATGCTGTCATCTGCTAGACCTTTGGGGCGTAAACTACCTAAAAGTCTTAGACCTAGTAAAGTTAGCAAGACCAAATCTAAAGCTTCTGACTCAACTGGCAGGAAAAAGACTACTGCGGGTACACGCAAGGAGAAACAGAAAAAGCCAATTAACAAGAGCGAAGTCAAGGGAAAAGGTGCCTCTCTTAAAGTTACATGTGAAGTGGAAGATCGCCCACATCCAGAAGCAAATGCTGGAAATCATAAGTTGGATGTTGTTGGAAAAATTAATGCTGATGACAACAGAGTATTGGTGAATGTATCTAATTTGGACATGCTGTCTGGTGTTGGTTTGGGGGAGCAACTTCTATCACCCCGTAATGCATGGGTGCGTTGTGATGATTGTCACAAGTGGCGGCGAATTCCAGCTGTGCTTGCAGACCGAATTGATGAAACTAACTGCACCTGGACATGTAAGGACAGCAGCGATAAAGCCTTTGCTGATTGTGCTATCCCTCAAGAAAAGTCAAATGCAGAGATTAATGCGGAGTTGGGATTATCAGATGCCTCGGGTGAAGAAGATGCATATGAAGGCTCCAAAAATTTTAAGGAATTAGAATTTCAGCCTCCATTAGTTTCCCAGGAGTCAACTTTTACCCATATTTTCACCAATGAATTTCTGCATCGCAGCCATAAAACTCAGACTATTGACGAGATAATGGTCTGTCATTGCAAGCCTCCTCAAGAAGGAAAGTTGGGCTGTGGGGATGAATGTCTAAATCGGATTCTTAATATTGAATGTGTGCAAGGAACATGCCCATGTGGGGACTGTTGTTCCAACCAGCAGTTCCAAAATCGCAAGTATGCTAGCCTGAAGTGGTTTAAATGTGGGAAAAAGGGTTATGGACTGAAGGCAATTGAGGGTGTAGCTCAAGGCCAGTTTCTTATTGAATATGTTGGAGAGGTGCTTGATATGCAAACGTACGAAGCACGGCAAAGAGAGTATGCTTTGAAGGGTCATCGACATTTCTATTTTATGACCTTGAATGGCAGTGAGGTGATAGATGCAAGCGCTAAAGGAAACTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGGACAGAAAAGTGGATGGTGAATGGGGAAATCTGTATTGGCCTGTTTGCATTGAGGGATATTAAGCAGGATGAAGAATTGACATTCGATTACAACTATGTAAGGGTTTTTGGTGCTGCTGCCAAAAAATGTTATTGTGGTTCACCTAACTGTCGAGGTTATATAGGTGGTGGTGATCCACTTAATGCTGAATTGATAGTTCAAAGTGATTCAGAAGAAGAATTTCCAGAACCTGTTATGCTTACCAAAGATGGTGAAATTGAAGATGCTGTACCTACACCCAAGTATTTTAATAATGCTGATACACAATCTGCTAAACATATGTTAAAAGACAGGGATATATTGGACAATTCTACAACTGGTACAGATTCAGATGGTTCTGCAGAGAAACAGAGTTCTATGAACCCTGCCTCTGCTGTTTCTCTGTTGCACAGCTCAGCAGACATGGAGGATTCAAAGGGAAAATTACCATCTGTTCGAGTTGAAGAAATTTCGCAACAAATGGATGATGTAACAAGCAAACCAATGCCTGCTGTACACCAAGGATATGAAAAGGAATTAGAGTTTGCAGACAAAACTACTTCCATTCAAAGATTAGAGACTACTTCTCCCCTTCCAAGTGTCAGCAAAATGTTACCAAATTCTACTGGTAGTAATAGGGAGTCCAAGTCTGAAATAATTGAAGGCAGGAAGACTACTAAGTTAAATGGTTCTGTTAAAAAGGGAAAGGTTCATTCTAATCCTCCAAATGGCCTTAAAACTGAGGTGACAGCCAATCGATTACAGGTGTCATCTATAAAACACAAAAAAGTAGAAGGTTCTTCCAATGGACGGTTTGAAGCAGTTCAGGAGAAACTTAATGAGTTGCTGGATGGAGATGGGGGAATAAGCAAAAGAAAAGATGCCACCAAAGGGTACTTGAAGCTTTTGTTTCTCACTGTGGCATCAGGTGATAGAAGCAATGGTGAAGCAATTCAAAGCAATCGAGATCTTTCCATGATCCTTGATGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATGAACAAAAATGGTTTACAGATGTTACATAACATTATGAAGCAGTACAGGCAGGACTTCAAAAAAATTCCAATACTACGAAAGCTTCTTAAGGTCTTAGAATTCCTAGAAGCAAGCAAGATTTTGACATCTGAACATATCAATGGTGGTCCTCCTTGTCGTGGAATGGAGAGCTTTAGAGAGTCAATGCTTTCTCTGACAGAGCATGAAGACAAACAGGTCCATCAAATTGCTCGAAACTTCCGAGACAGATGGTTTCCCAGACACGTCAGAAAACATGGCTATATGGACAGGGATGATAATAGAGTGGAATCTCACAGAAGTTTCAACTGTAACAGATATTCAGCATCACACAGTCATAGGCATGAGCAGGATTTAAGGCCTACAGAAGCAATGGATTGTAGTCAGCAGTCGATGATTGTGACAACTACAGTAGATGCTGATGCCCGCGAAGGCTGTCCTGCACAGTCTGTAGATGGGGTTGAAATCAAAGGAGCTAAAAAATGCAAGCGCAAAAGCCGATGGGATCAACCAGCAGAGACAAACTCACATTCTGATGCCGTTATGAGCTCTATTGGTGAAAGCCAGAACATTCACGAGGATGTTCCACCAGGGTTTTCGTGTCCAGTAGGTTCATTAAATGCTTCCCTAAACTCTGGTAATCTTGCCTTGCAAAATGCAAGCCGTTCTGGATGTCCCTCTGATATAGTTATTGGTCATCCAAAAGAGAAATTTAACTCTTGCTTGCCTGTCTCATATGGAATGCCATGGTCTGTTACCCAGCAATATGGAACACCTCATGCTGAATTTCCAGAGTGTTGGATCACTGCACCTGGCATGCCTTTCAACCCATTTCCTCCACTACCCCCATATCCACGGGACAACAAAGACTGTCAACCTTCTAATACTACTAATGCTATGATAATTGATCAGCCTGCTGAAGTTAAGCAGGGGGATACCAGTGGTATGGTTAATTGTTGCTCAGATGATATGATTCCCAGCACAACTGGTGCTAACCCTGAAGACTCGAACCTTCTGTTTGAGGACAATAAACACATAAGTAAACGATTGAAGGGTGACTCCAATGATTTGGGAACGAGGTACTTTAGACAGCAGAAAATACATCGACCATGGTTCAAGAGGAACGCATGGAAATGTGATGACAACAACTCTAGTGGTGATATGTGCAGTATAGATGTAGGAGATGTACCAAAAGAGTCAAAAGTTACTTGTGATGCGGAGGATGCAATCTGTAGAGAGGAGTAA 6144 0.4229 MIEMGSCGRSATIDDPSGGAVIEQHLCSEVQEQVVSVQESCLEEACNVVDSNVELSTVADGCVGEDRVGSEGCVNAAEGSGEGLGLGSECENANLLPLKKAAEDDCQNCLGVSCGSIEVPCANSGSEGNFQDEGNFDLPSQSLTADDSQRHCAQQDEQKDDKSGSLTTDDSQRHCAQQDEQKDDKSGSLITDDLQRHCAQQDEQKDDKSGSLITNDSQRHCAQQDEQKGDKSDVLPAAGDDSAVMEGKNDDTGVLADAFSHVLDFRDCKVSLESESMADLLVDCNQQSEQEEIMRNADPLLNVVEKCDTLLGKETDACRQTSPTPATEVPSGAPSGALCTDTEVESTSDQPCDQKDGEDQNSTCEEKVKAFVDEEIININSCVKISSSPCCHGTVGSSSVVDFPCEPALLDLGCEMKNGMLQIEDDLCKLKDCSSEETTNSIFRKPFSPESGLPSVALITDCSSKDVPDLHCKGDDFSINNNNAVDYPGQMDNDGTEAVEVDCITESIPLPSQRNSQRTKFGRKTQTKKASRKCKNKTKVTHPNGGMKLNLEAARKKRSCFSKPARSSIWGLIGNIEQFFEQDNELGVGEALCQEMGKARSKRQSGKAVKNGASTTSLSSVQKCSASTTRFRLKIKIGKDVDLSCSNVLIPESVDGLASASYLGSGSGCQKVASNAEDKISEAVALGNSESFNNDLDKDGLVLNEQVANNSLETTEITEKSYGVAEEPCLAGPPEKVVEALIEPINNKGMDPGTSPDSEVINSIPEVQVGERHQEDHAVLGSSKELNSKLDVTISKRGKKKEKIICSSNCITEDGSQGPPGNSRAKHSKNCRRKKNCRDAVSSLELPTFTEISKSVSSKDLSPESLPLSGETELGGSTEALKVKDHMDIKTSSKPSVDHGCSESQVSENMLSSARPLGRKLPKSLRPSKVSKTKSKASDSTGRKKTTAGTRKEKQKKPINKSEVKGKGASLKVTCEVEDRPHPEANAGNHKLDVVGKINADDNRVLVNVSNLDMLSGVGLGEQLLSPRNAWVRCDDCHKWRRIPAVLADRIDETNCTWTCKDSSDKAFADCAIPQEKSNAEINAELGLSDASGEEDAYEGSKNFKELEFQPPLVSQESTFTHIFTNEFLHRSHKTQTIDEIMVCHCKPPQEGKLGCGDECLNRILNIECVQGTCPCGDCCSNQQFQNRKYASLKWFKCGKKGYGLKAIEGVAQGQFLIEYVGEVLDMQTYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQDEELTFDYNYVRVFGAAAKKCYCGSPNCRGYIGGGDPLNAELIVQSDSEEEFPEPVMLTKDGEIEDAVPTPKYFNNADTQSAKHMLKDRDILDNSTTGTDSDGSAEKQSSMNPASAVSLLHSSADMEDSKGKLPSVRVEEISQQMDDVTSKPMPAVHQGYEKELEFADKTTSIQRLETTSPLPSVSKMLPNSTGSNRESKSEIIEGRKTTKLNGSVKKGKVHSNPPNGLKTEVTANRLQVSSIKHKKVEGSSNGRFEAVQEKLNELLDGDGGISKRKDATKGYLKLLFLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRAVLNDIMNKNGLQMLHNIMKQYRQDFKKIPILRKLLKVLEFLEASKILTSEHINGGPPCRGMESFRESMLSLTEHEDKQVHQIARNFRDRWFPRHVRKHGYMDRDDNRVESHRSFNCNRYSASHSHRHEQDLRPTEAMDCSQQSMIVTTTVDADAREGCPAQSVDGVEIKGAKKCKRKSRWDQPAETNSHSDAVMSSIGESQNIHEDVPPGFSCPVGSLNASLNSGNLALQNASRSGCPSDIVIGHPKEKFNSCLPVSYGMPWSVTQQYGTPHAEFPECWITAPGMPFNPFPPLPPYPRDNKDCQPSNTTNAMIIDQPAEVKQGDTSGMVNCCSDDMIPSTTGANPEDSNLLFEDNKHISKRLKGDSNDLGTRYFRQQKIHRPWFKRNAWKCDDNNSSGDMCSIDVGDVPKESKVTCDAEDAICREE 2047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 1384 1415 - -
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 150 213 - -
Pumo10g01291 2047 SMART shorttest3 1139 1190 IPR006560 GO:0005634|GO:0042054
Pumo10g01291 2047 Pfam AWS domain 1154 1187 IPR006560 GO:0005634|GO:0042054
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 512 546 - -
Pumo10g01291 2047 SUPERFAMILY SET domain 1119 1329 IPR046341 -
Pumo10g01291 2047 Gene3D - 1022 1084 - -
Pumo10g01291 2047 CDD SET_SETD2 1190 1332 IPR044437 GO:0010452|GO:0046975
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 812 836 - -
Pumo10g01291 2047 SMART set_7 1191 1314 IPR001214 GO:0005515
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 521 539 - -
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 878 893 - -
Pumo10g01291 2047 ProSiteProfiles Post-SET domain profile. 1316 1332 IPR003616 -
Pumo10g01291 2047 FunFam Histone-lysine N-methyltransferase 1090 1347 - -
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 318 337 - -
Pumo10g01291 2047 ProSiteProfiles AWS domain profile. 1139 1189 IPR006560 GO:0005634|GO:0042054
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 1481 1498 - -
Pumo10g01291 2047 Pfam CW-type Zinc Finger 1031 1077 IPR011124 GO:0008270
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 130 249 - -
Pumo10g01291 2047 ProSiteProfiles Zinc finger CW-type profile. 1025 1079 IPR011124 GO:0008270
Pumo10g01291 2047 ProSiteProfiles SET domain profile. 1191 1308 IPR001214 GO:0005515
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 130 149 - -
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 895 912 - -
Pumo10g01291 2047 Gene3D SET domain 1087 1341 IPR046341 -
Pumo10g01291 2047 SMART PostSET_3 1316 1332 IPR003616 -
Pumo10g01291 2047 FunFam Histone-lysine N-methyltransferase 1023 1084 - -
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 221 235 - -
Pumo10g01291 2047 Pfam SET domain 1202 1308 IPR001214 GO:0005515
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 852 967 - -
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 1481 1501 - -
Pumo10g01291 2047 PANTHER SET DOMAIN PROTEINS 531 1807 - -
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 932 963 - -
Pumo10g01291 2047 MobiDBLite consensus disorder prediction 1395 1415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01291 Pumo-Chr10 16929046 16944011 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01291 1174 1331 C2H2 Transcription Factor Family AT2G23740 34.254 3.37e-21 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pumo10g01291 SET 2.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01291 - - gmx:100795379 3450.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01291 10 16929046 16944011 Pumo10g01291 10 16929046 16944011 ECH