Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01265 ATGGGCGATAGGGTGGAAACGCTTGCCAGAATAGCCCAGTGGAAAATCGATAACTTCGGACCTTCTTCCTACAAAAAATCTGACCCCTTCAAGGTCGGAATATGGAACTGGTACTTTTCAATAGTGAGGAATAGGTACCTCTACATACATCTTTTTCCAGAACCTTCGCAGGTTTTGAAGGATAACCCACCCTTTGCTCGATTCATTCTTCGAGTCTCCAATGCCGGCTCATCCCGCAGCTTTCATATTTCCCCTGTTCAAGAAAAGCTGCTTAGGACACATGATGACTTTGTGTGGCCTGTGGATACTACTTTTGTTGGTCGCTTCATCATTGATGTTGAGTTTCTAGACCTGAAGATATGCCCTCCGAATGGTGGAGAAACTAGTTCTGTATGGCCATCTGATGGAAATTCGCAATCCATTGCATCCCAAAGTAGCACTCTTCGTAGCCTCTCTCGCATGCTTGATGAGGCTATACATGCTGACCTAACCATCATCACTGCTGATGGCACATTGAGAGCTCACAAGGCAGTTCTCTCAGCAAGTTCTCCAGTGTTCCAGAGCATGTTTCATCACAACCTGAAGGAAAAAGAGTCCTCCACAATCCATATAGAAGACATGTCACTTGAATCCTGCATGGCTCTTCTGAGTTACTTGTATGGAACAATCAAGCAAGAAGATTTCTGGAAACACCGGCTTGCATTGCTTGGAGCTGCTAATAAATATGACATTGGTAGTCTCAAAGATACCTGTGAGGAAAGCCTTCTGGAAGATCTTAACACAGGAAATGTTCTTGAGATGCTAAATGAGGCTTGGTTTTATCAATTGCACAAGTTAAAGAAAGGATGTTTGGTGTTCTTATTCCAATTTGGTAAGATACATGATATTAAAGTTGAAATAAATAATTTTTTCCAGCATGCAGATAGGGAGCTAATGCTGGAGATGTTTCAGGCAGGTGCTTTCAATTTCGAACCCGGTATAAGTTAA 987 0.4255 MGDRVETLARIAQWKIDNFGPSSYKKSDPFKVGIWNWYFSIVRNRYLYIHLFPEPSQVLKDNPPFARFILRVSNAGSSRSFHISPVQEKLLRTHDDFVWPVDTTFVGRFIIDVEFLDLKICPPNGGETSSVWPSDGNSQSIASQSSTLRSLSRMLDEAIHADLTIITADGTLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCMALLSYLYGTIKQEDFWKHRLALLGAANKYDIGSLKDTCEESLLEDLNTGNVLEMLNEAWFYQLHKLKKGCLVFLFQFGKIHDIKVEINNFFQHADRELMLEMFQAGAFNFEPGIS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01265 328 CDD MATH 14 100 IPR002083 GO:0005515
Pumo10g01265 328 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Pumo10g01265 328 Pfam BTB/POZ domain 154 257 IPR000210 GO:0005515
Pumo10g01265 328 SUPERFAMILY POZ domain 145 257 IPR011333 -
Pumo10g01265 328 Gene3D Potassium Channel Kv1.1; Chain A 133 288 IPR011333 -
Pumo10g01265 328 PANTHER OS08G0495500 PROTEIN-RELATED 1 318 IPR044714 -
Pumo10g01265 328 SMART BTB_4 161 259 IPR000210 GO:0005515
Pumo10g01265 328 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01265 Pumo-Chr10 16655528 16658295 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pumo10g01265 BTB 1.8e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01265 K10523 - gmx:100787262 613.224