Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01257 ATGGCAGAGCGTGTGTTCCTCACTCCTTCCTCACTGCCTTTACCTTCTCAGTCTCAACACTATCCAACCAGAATGGCTCTCTTGGGCGGCGCCGCCTCCGCTCGCATCATTCCCTCCGTCTCACTCTCTTCCTCTTCTCGCCCCTTCTTCTCCTTCTCATCTTCCAAACTCCAATGCTTGCGCTCCTCTCCTCGCATTTCGCACCTGTTTCTCAATCAGCGGAGAGTGGAGGTTCGCGTTTCGAGTGGAGGATACGGAACGGTGTCGGCGCCGAAGTCCGTTGCGTCTGATCCTGATCAGTTGAAGAGCGCTAGAGAAGATATTAAGGAGCTTCTCAACTCCAAGTTCTGCCATCCTATCCTGATTCGTTTGGGATGGCATGATGCTGGTACTTATAATAAAAATATTGAGGAGTGGCCACAGAGAGGTGGAGCTAATGGTAGTTTAAGATTTGAAATTGAGCTGAAACATGCAGCCAATGCTGGACTTGTCAATGCATTGAAACTTCTTCAGCCAATCAAAGACAAATACTCTGGTGTGACATATGCAGACTTATTTCAGTTGGCTGGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCAAAAATCCCTATGAAATATGGAAGAGTGGATGTATCTGGACCTGAACAATGCCCTGAAGAAGGGAGACTTCCTGATGCTGGCCCCCCTTCACCTGCTGATCATTTGCGTCAAGTTTTCTACCGAATGGGTTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCACACACGCTGGGGCGGTCTAGACCAGATCGCAGTGGTTGGGGAAAGCCTGAGACTAAATATACGAAAGATGGGCCAGGAGCACCTGGAGGACAATCCTGGACAGCGCAATGGTTGAAATTTGACAACTCTTACTTCAAGGACATCAAAGAAAAAAAGGATGAAGATCTACTTGTATTGCCAACTGATGCTGCTCTTTTTGAAGACCCATCCTTCAAGGTATATGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCCCATGCAAAACTTAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGCATTGTGATAAATGATTCTCCTAATGCAGGGGCAGAGAAGTTTGTAGCAGCCAAGTACTCCACTGGAAAGAGAGAGCTGTCTGAGGCTATGAAGCAGAAGATACGGGCTGAATATGAGGCAATTGGTGGAAGCCCAGATAAGCCTCTACAGTCAAACTATTTTCTAAATATCATGATTATCATTGCTGTTTTGGCATTTTTGACATCACTACTTGGAAACTAG 1311 0.4645 MAERVFLTPSSLPLPSQSQHYPTRMALLGGAASARIIPSVSLSSSSRPFFSFSSSKLQCLRSSPRISHLFLNQRRVEVRVSSGGYGTVSAPKSVASDPDQLKSAREDIKELLNSKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEIELKHAANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVINDSPNAGAEKFVAAKYSTGKRELSEAMKQKIRAEYEAIGGSPDKPLQSNYFLNIMIIIAVLAFLTSLLGN 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01257 436 CDD ascorbate_peroxidase 89 359 - -
Pumo10g01257 436 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 104 228 - -
Pumo10g01257 436 Pfam Peroxidase 105 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo10g01257 436 Gene3D Peroxidase, domain 2 226 349 - -
Pumo10g01257 436 PRINTS Plant ascorbate peroxidase signature 97 117 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo10g01257 436 PRINTS Plant ascorbate peroxidase signature 118 133 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo10g01257 436 PRINTS Plant ascorbate peroxidase signature 198 210 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo10g01257 436 PRINTS Plant ascorbate peroxidase signature 179 197 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo10g01257 436 PRINTS Plant ascorbate peroxidase signature 317 341 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo10g01257 436 MobiDBLite consensus disorder prediction 255 287 - -
Pumo10g01257 436 PRINTS Haem peroxidase superfamily signature 180 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo10g01257 436 PRINTS Haem peroxidase superfamily signature 288 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo10g01257 436 PRINTS Haem peroxidase superfamily signature 118 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo10g01257 436 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo10g01257 436 PRINTS Haem peroxidase superfamily signature 198 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo10g01257 436 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 88 359 IPR044831 GO:0004601|GO:0034599
Pumo10g01257 436 ProSiteProfiles Plant heme peroxidase family profile. 180 405 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo10g01257 436 ProSitePatterns Peroxidases proximal heme-ligand signature. 248 258 IPR019793 -
Pumo10g01257 436 FunFam L-ascorbate peroxidase T, chloroplastic 226 349 - -
Pumo10g01257 436 Gene3D - 104 357 - -
Pumo10g01257 436 SUPERFAMILY Heme-dependent peroxidases 99 357 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01257 Pumo-Chr10 16518036 16523629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01257 104 354 Peroxidase AT5G66390 29.010 2.53e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01257 K00434 - gmx:100802238 702.975