Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01253 ATGGCATCAGAGCTTCAATTGCCCCCAGGTTTCAGATTCCATCCAACGGACGAGGAGCTCGTGATGCATTATCTCTGCCGCAAATGCACGTCTCAGCCAATCGCCGTTCCCATCATCGCCGAAATCGACCTCTACAAATACGACCCTTGGGACCTTCCAGGATTGGCTTCATATGGAGAGAAAGAGTGGTACTTCTTTTCACCGCGAGACCGGAAATACCCGAACGGTTCGAGACCGAACCGGGCGGCGGGAACCGGTTACTGGAAGGCAACCGGGGCGGATAAGCCCATTGGTCACCCGAAACCGGTTGGGATAAAAAAAGCGTTGGTCTTTTACGCAGGGAAAGCACCGAAGGGTGACAAAACCAATTGGATCATGCACGAGTATCGTCTCGCCGATGTAGATCGCTCCGTTCGCAAAAAGAACAGCCTAAGGTTGGATGATTGGGTGCTTTGCCGTATTTACAACAAGAAGGGCACGATCGAGAAACTACAACCAAGCAGCGATGTTGTTGTTAGCCGCAAAGTGGAATCATCGGAGATCGAAGAAGACAAAAAGCCAGAGATTCTGAAAAGCGGAGGTTGTCTTCCGCTTCCGCCGCAGCGACCGCCGCAAGCGTCGGCGGCGAAGACGGATTACATGTACTTCGACCCGTCGGATTCAATCCCGAAGCTGCACACGGACTCGAGCTGTTCGGAGCACGTGGTTTCGCCGGAATTCGCGAGCGAGGTGCAGAGCGAGCCCAAGTGGAACGAGTGGGGCGAGAAAAGCCTCGAATTTCCATTTAATTACGTGGATGCCACTCTCAACAACAACAGCTTCACGGCCCAATTCCAGAGCAATAATCAGATGTCGCCGCTGCAGGACATGTTCATGTACTGGCCCAAGTCCTTCTGA 897 0.5307 MASELQLPPGFRFHPTDEELVMHYLCRKCTSQPIAVPIIAEIDLYKYDPWDLPGLASYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGTIEKLQPSSDVVVSRKVESSEIEEDKKPEILKSGGCLPLPPQRPPQASAAKTDYMYFDPSDSIPKLHTDSSCSEHVVSPEFASEVQSEPKWNEWGEKSLEFPFNYVDATLNNNSFTAQFQSNNQMSPLQDMFMYWPKSF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01253 298 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Pumo10g01253 298 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Pumo10g01253 298 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Pumo10g01253 298 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Pumo10g01253 298 FunFam NAC transcription factor 16 161 - -
Pumo10g01253 298 PANTHER NAC TRANSCRIPTION FACTOR 56 7 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01253 Pumo-Chr10 16427475 16429749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01253 1 298 NAC Transcription Factor Family AT1G01720 70.588 4.54e-148 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pumo10g01253 NAM 4.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01253 - - gmx:100805768 563.533