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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pumo10g01237
ATGCCAAATCCAAAGCACGTTTTGCACGGCACTCTCTTCCTCTCGCTACTTCTCCAGGCAGTGTCTAAATCCACGATCGAGCCATGCTCGAACTCGGACTCATGCAACGCGCTCCTAGGATACACCCTCTACACGGACCTCAAAGTCTCCGAAGTGGCGTCCCTGTTCCAAATCGACCCCATATCGCTCCTCACCGCGAACGCCATCGACATCTCCTACCCCGACGTGGAGCACCACATCCTCCCCTCCAAACTCTTCCTCAAAGTCCCCATCTCCTGCTCCTGCGTCGATGGCATTCGCAAATCCGTCGCCACCCACTACAAGACCCGCCCCTCCGACACCCTCTCCTCCATCGCCGACTCCGTCTACGGTGGCCTCGTCTCCTCCGACCAGCTCCGCGAGGCCAATTCCATCTCCGACCCTTCCGTTCTCGATGTCGGACAGAACCTCGTCGTTCCTCTCCCCTGCACCTGCTTCAACGGCTCCGATAACTCCCTCCCCGCGATTTACCTCTCTTATGTTGTTCGCCCCGTTGATACCCTGGCTGCCATTGCTGCCAGGTACTTCACCACTCTCACCGATTTGATGAATGTTAATGCCATGGGAAGCACTGCTATTAACGATGGCGATATCCTTGCTGTTCCAATACCCGCTTGTGCTTCGAATTTTCCGAAATCCGCCTCTGATTTTGGCTTACTTGTTCCTAATGGAAGCTATGCCATTACCGCGGGGCACTGTGTGCAGTGTAGCTGTGGACCGAAAAACCTTGATCTGTACTGTATGCCGGCTTCTTTGGCTGTTTCTTGCTCCAGCATGCAATGTAGAGGCAGCAACCTTATGCTTGGGAATGTTACCGTGCAGCAGACTAGTGGTGGTTGCAATGTAACTACTTGCAATTATGATGGCATTGTTAATGGCAGCATTGTAACAACGTTGTCCCCTTCTCTTCAGCCTCGATGTCCAGGGCCGCGGGAATTCCCTCCCCTCATTGCCCCACCTACATCTGTTGCAAGGGACATAGTGTTTGCACCAGCACCATCACCGCTATTTGATGGAGCCAGTCCAGCATCACCCAAATCGTCACTGGTGCCTTCAACAGGGCTTCCAGGAGGATTCTCTCCTGCAAATGGCCCTATTAGTGGCATTTCTTCTGGTGCTTCTGCTGCATGCTCCTTGGTGAAACCATTGCCCACTTTGACGTATGCACTTGTGTTATTGCTTGTCAAGTTGATGATACCTGTGGCATTGTAA
1251
0.5308
MPNPKHVLHGTLFLSLLLQAVSKSTIEPCSNSDSCNALLGYTLYTDLKVSEVASLFQIDPISLLTANAIDISYPDVEHHILPSKLFLKVPISCSCVDGIRKSVATHYKTRPSDTLSSIADSVYGGLVSSDQLREANSISDPSVLDVGQNLVVPLPCTCFNGSDNSLPAIYLSYVVRPVDTLAAIAARYFTTLTDLMNVNAMGSTAINDGDILAVPIPACASNFPKSASDFGLLVPNGSYAITAGHCVQCSCGPKNLDLYCMPASLAVSCSSMQCRGSNLMLGNVTVQQTSGGCNVTTCNYDGIVNGSIVTTLSPSLQPRCPGPREFPPLIAPPTSVARDIVFAPAPSPLFDGASPASPKSSLVPSTGLPGGFSPANGPISGISSGASAACSLVKPLPTLTYALVLLLVKLMIPVAL
416
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pumo10g01237
416
Pfam
LysM domain
173
215
IPR018392
-
Pumo10g01237
416
Pfam
LysM domain
107
153
IPR018392
-
Pumo10g01237
416
CDD
LysM
172
214
IPR018392
-
Pumo10g01237
416
SUPERFAMILY
LysM domain
171
216
IPR036779
-
Pumo10g01237
416
Gene3D
LysM domain
99
158
IPR036779
-
Pumo10g01237
416
SMART
LysM_2
172
215
IPR018392
-
Pumo10g01237
416
SMART
LysM_2
106
153
IPR018392
-
Pumo10g01237
416
Gene3D
LysM domain
159
226
IPR036779
-
Pumo10g01237
416
ProSiteProfiles
LysM domain profile.
171
214
IPR018392
-
Pumo10g01237
416
SUPERFAMILY
LysM domain
105
154
IPR036779
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pumo10g01237
Pumo-Chr10
16281166
16283893
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pumo10g01237
15
391
LysM Receptor-like Protein (LYPs) Gene Family
AT1G21880
72.105
0.0
562
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Pumo10g01237
-
-
gmx:100777292
764.992
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Pumo10g01237
10
16281166
16283893
Pumo10g01237
10
16281166
16283893
ECH
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