Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01234 ATGGAGGACCAAAATGGTAGTGGTAAGTTGAGCGAGGGGCTTCGCAAGTTAAAGCCTTACCTTGCTATATTGTCCCTTCAGTTTGGCTACTCAGGGATGTATATCATCACTATGGTTTCTTTCAAGCATGGCATGAGTCATTGGATACTCTCAGTGTACCGTCATGTAGTTGCTGCTATTATAATAGTCCCTTTTGCACTTGTCCTTGAAAGAAAAATAAGACCAAAGATGACTCTTCCCATCTTCCTGAGGATAGTGGCACTTGGTTTCCTTGAGCCAGTGCTAGATCAGAACTTGTACAACATGGGAATGAAGATGACCTCAACAACGTTTGCATCCGCCACGGTTAATGTCCTCCCGGCCATTACTTTTGTAATGGCACTCATTTTCGGGCTAGAGAAGGTGAACTTGAGAAAATTCCACAGCCTAGCCAAGGTCATTGGAACCGTTATAACAGTTTCAGGAGCTATGGTTATGACTCTGTACAAAGGCCCTGCCTTCCAAATCATAAAGGGTGGAGGAGCCATCAGCCACCATAGCAACTCTAGCAGCAGTACCACTGAACCCTCTGACCAGCACTGGGTAGTTGGCACTCTATATCTCATATCAAGTTGTGCTAGTTGGGCTGGCTTCTTCATTTTGCAATCATTCACTTTGAAGAAGTACCCGGCAGAGCTCTCACTGACAGCTTGGATTTGCGTGATGGGTATTATTGAGGGTTCAATCGCATCCCTTATATTTGAACGAGACTTTAGTGTATGGGCCATAGGCTGGGACTCAAGGCTTCTTGCCTGTGTTTATTCTGGGGTGATTTGTTCTGGAATGGCATACTATGTACAAGGGGTTGTAACAAGGGAACGTGGACCAGTGTTTGTGACTTCTTTCAGCCCTCTATGTATGATTATCACCGCTGCATTGGGTTCCCTTGTCTTAGCCGAGCAAGTTCATCTAGGAAGTATATTTGGGGCTATTCTGATTGTGTGCGGACTTTACACTGTGGTGTGGGGCAAAAGCAAAGACCGTAAGAACACAACAGAAATAGAGAAAGGCGAAAGCCAAGAATTGCCAATAAAGGACGGTACAAAATCAGCGTCAGACATGTTTGATGGGATTGAAATCAATGTTCCTGCTGAGGTGTTGAATAAAGGGGGAGGGAAAAATGTGCCACCATCGTTATAG 1179 0.4495 MEDQNGSGKLSEGLRKLKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAIIIVPFALVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPAITFVMALIFGLEKVNLRKFHSLAKVIGTVITVSGAMVMTLYKGPAFQIIKGGGAISHHSNSSSSTTEPSDQHWVVGTLYLISSCASWAGFFILQSFTLKKYPAELSLTAWICVMGIIEGSIASLIFERDFSVWAIGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSIFGAILIVCGLYTVVWGKSKDRKNTTEIEKGESQELPIKDGTKSASDMFDGIEINVPAEVLNKGGGKNVPPSL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01234 392 PANTHER WAT1-RELATED PROTEIN 19 345 IPR030184 GO:0016020|GO:0022857
Pumo10g01234 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 161 - -
Pumo10g01234 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 258 339 - -
Pumo10g01234 392 Pfam EamA-like transporter family 197 334 IPR000620 GO:0016020
Pumo10g01234 392 Pfam EamA-like transporter family 28 152 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01234 Pumo-Chr10 16226143 16230176 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01234 14 359 Nodulin-like Gene Family AT4G08300 69.075 3.64e-174 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01234 - - gmx:100783910 728.013