Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01233 ATGGGTACGTGGTTCAGAAATGCAAAGCCGTATCTGCTGTTATTGGCGGTTCAGTTTGGTTCTGCAGGGATGTTCATATTTGCCATGGATGCTATAAAGAAGGGTATGAGCCATTACGTGTTCACCGTCTACCGTAATGTCATCGCCTCTGTAACTCTCGCTCCCTTTGCATTTCTTCTAGAAAGGAAAGTTAGGCCCAAGATGACTGTCCGGATATTTTCAGAGATTATGGCGCTGGCTTTCTTCGAAATAATACTGGATCAGTGCTTCGCCCTCTTGGGCATGAAATTCACGTCGGCATCCTTTCTATCTGCGGTGATGAACTCCGCACCCACTGTTACTTTTTTGTTGGCTGTCATTCTAAAATTGGAGCACATGAAGATAAAGGAGGTAACATGTCAAGCCAAAGTGATTGGCACAGTAATAACTTTTGGAGGCACCTTGCTAATGGCACTATACAAAGGCCCCGTACTTAGTGTTATGAGATCTTCAACCAGCCATGCGGAGAATGTGAACAACCCCACTGGTAACCACTGGATCATAGGCACATGTTTCCTCCTTATTGGTTGTGCTGGCTTTTCTGCCTTTTACATATTACAAGTCATAACATTGAGAAAATACCCAGCAGAGATGTCCCTGGCCACTTGGGTTTGCTTTGTAGGTGCACTTCAAAGTTCTATTGTAGCAGTCTTCGTAGAACGCCACCACCCTCATGCCTGGGCCCTTGGGTGGGATACACGACTCTTTGCTCCTGCTTACGCGGGAATAGTTTCATCTGGAGTTCAGTATTACATACAAGGCGTCGTCATAAAATCCATGGGCCCAGTTATTGTGACTGCTTTTAATCCCCTGCGTATGATCATTATTACCACCTTGGCCTGCATAGTCCTATCTGAGCAACTCTACCTTGGAAGTATTATTGGAGCAATAGTTGTGGTTCTTGGGCTCTATTTTGTTGTGTGGGGAAAATATAAAGAATGCCACGGAAGATCAATGCCACCGTCCCCTGCAAAGGATAACTCTCCAGAAGACCAACGGCAGCTACCGATCACAGCTCCTAGGAATGATAGCAATGATAATAAGGGTTAA 1089 0.4527 MGTWFRNAKPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFTVYRNVIASVTLAPFAFLLERKVRPKMTVRIFSEIMALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPTVTFLLAVILKLEHMKIKEVTCQAKVIGTVITFGGTLLMALYKGPVLSVMRSSTSHAENVNNPTGNHWIIGTCFLLIGCAGFSAFYILQVITLRKYPAEMSLATWVCFVGALQSSIVAVFVERHHPHAWALGWDTRLFAPAYAGIVSSGVQYYIQGVVIKSMGPVIVTAFNPLRMIIITTLACIVLSEQLYLGSIIGAIVVVLGLYFVVWGKYKECHGRSMPPSPAKDNSPEDQRQLPITAPRNDSNDNKG 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01233 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Pumo10g01233 362 PANTHER WAT1-RELATED PROTEIN 10 332 IPR030184 GO:0016020|GO:0022857
Pumo10g01233 362 MobiDBLite consensus disorder prediction 331 362 - -
Pumo10g01233 362 Pfam EamA-like transporter family 9 151 IPR000620 GO:0016020
Pumo10g01233 362 Pfam EamA-like transporter family 181 320 IPR000620 GO:0016020
Pumo10g01233 362 MobiDBLite consensus disorder prediction 338 362 - -
Pumo10g01233 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 217 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01233 Pumo-Chr10 16200151 16214078 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01233 2 361 Nodulin-like Gene Family AT1G44800 43.370 1.60e-107 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01233 - - gmx:100776215 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01233 10 16200151 16214078 Pumo10g01233 10 16200151 16214078 ECH