Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01232 ATGGGTACGTGGTTCACAAATGCAAGGCCATATCTGCTGTTATTGGCGGTTCAATTTGGTTCTGCAGGGATGTTCATATTTGCCATGGATGCTATAAAGAAGGGTATGAGCCATTATGTGTTCATCGTCTACCGTAATGCCATCGCCTCTGTATCTCTCGCTCCCTTCGCATTTGTTCTAGAAAGGAAAATTAGGCCCAAGATGACTTTCCGGGTATTTTCAGAGATTATGGCACTGGCTTTCTTCGAAATAATACTGGATCAGTGCTTCGCCCTCTTGGGCATGAAATTCACGTCGGCATCTTTCCTATCTGCTGTCATGAACTCCGCACCTTCTATTACTTTTGTGATGGCAGTCATTCTAAGAATGGAGCACATGAAGATTAAGGAGGTGGCATGTCAAGCCAAAGTGATTGGCACAGTAGTAACATTTGGAGGCACCTTGCTTATGGCACTGTACAAAGGTCCCGTGCTTAGTTTTATGCGATCTTCAACTAGCCATGCTACCCAACCTGAGCATGTGGCCAACCCCACTGGCAACCATTGGGTCATAGGGACATTGTTCCTCCTCATTGGTTGTGCAGGCTTTTCTGCATTTTACATATTACAGGCCATAACATTGAGAAAATACCCTGCGGAGATGTCGCTGGCCACTTGGGTTTGCTTTGTAGGTGCACTTCAAAGCTCTATTGTTGCAATCTTCGCAGAACGCCACCACCCTCATGCCTGGTCCCTTGGTTGGGATACACGACTCTTTGCTCCTGCTTACGCGGGAATAGTTACTTCTGGAGTTCAGTATTACATACAAGGCATGGTCTCAAAAACTATGGGCCCAGTTATTGTGACTGCTTTTAACCCTCTGCGTATGATCATTGTTACGGCCTTGGCCTGCATCATCTTATCTGAGCAACTCTTCCTTGGAAGTATTATTGGAGCAATAGTTGTGGTTCTTGGGCTCTATCTAGTTGTGTGGGGAAAAGCAAAAGAACGCAGAGGTCTGAATACACCGTTCCCTGCAGAAAATAACTTTCCAGAAGACCAACGACAGCTACCGGTCACAGCTCCAAGGAATGATAGCATTAATAATAATAATAATAATAATAAGGCTTAA 1110 0.4495 MGTWFTNARPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIASVSLAPFAFVLERKIRPKMTFRVFSEIMALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSITFVMAVILRMEHMKIKEVACQAKVIGTVVTFGGTLLMALYKGPVLSFMRSSTSHATQPEHVANPTGNHWVIGTLFLLIGCAGFSAFYILQAITLRKYPAEMSLATWVCFVGALQSSIVAIFAERHHPHAWSLGWDTRLFAPAYAGIVTSGVQYYIQGMVSKTMGPVIVTAFNPLRMIIVTALACIILSEQLFLGSIIGAIVVVLGLYLVVWGKAKERRGLNTPFPAENNFPEDQRQLPVTAPRNDSINNNNNNNKA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01232 369 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020
Pumo10g01232 369 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020
Pumo10g01232 369 PANTHER WAT1-RELATED PROTEIN 10 337 IPR030184 GO:0016020|GO:0022857
Pumo10g01232 369 MobiDBLite consensus disorder prediction 335 369 - -
Pumo10g01232 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 328 - -
Pumo10g01232 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Pumo10g01232 369 MobiDBLite consensus disorder prediction 340 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01232 Pumo-Chr10 16165713 16169882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01232 7 363 Nodulin-like Gene Family AT2G37460 42.737 1.61e-106 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01232 - - gmx:100811984 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01232 10 16165713 16169882 Pumo10g01232 10 16165713 16169882 ECH