Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01231 ATGGAAGAAATATGTTGTTGTGCTAGTTTTGGCAAGAAATTCACTAAGGCAAAGCCTTATTTGTTAACGATAGGACTTCAATTTGGGTTCGCCGGAGCATACATCTTCTCCGTCGCTAGTCTCAACCATGGAATGAATCGCTATGTGTTCGTTGTCTATCGCAATGCCATCGCTGCATTGGCCCTCGCTCCTTTTGCATTGATTTTTGAGAGGAAAATTAGGCCAAAGATAACACTCCCTGTCTTCTTACAGATAGTGGCACTCGGATTTGTGGAGCCAGTGATTGATCAAGGGTTCACTTTCTTGGGCATGCAATACACGTCGGCTTCATTTGCCTCTGCCATAATGAATGCCGTGCCTTCTGTCACTTTTGTGCTAGCCGTAATTCTAAGGTTAGAGCGTGTAAATGTAAAAGAGGTGAGGAGCCTAGCAAAGGTGATTGGGACGTTGGTAACCTTTTCAGGTGCTTTGTTAATGACACTTTACAAAGGTCCTCAAATTAAGCTATTTTTCTCTCCAAACACAACCCACCACCAAGATGGAAGTCACTCTCCTCAGGTTATCAAACACTGGCTCTCAGGGACTCTCTTTCTACTCCTGGGTTGTGTCGCTTGGTCTTCTTTCTTCATTTTACAGTCCATAACATTGAAAAGGTATCCGGCAGAATTGTCACTGTCTTCATTGGTATGCTTATCGGGTGCTTTGCAAGCCAGCGTGGTGGCAATTTTAGCGACTCGTCATTCTGGGCTTGCGGCATGGGCCTTAGGGTGGGACTTCAGGCTCTATGGTCCACTCTACACGGGAATAGTTACCTCTGGAATTACGTATTATGCGCAAGGGTTGGTATTGCAAACCAGAGGTCCAGTATTTTTAACTGCCTTTAATCCCCTTTGCATGGTCATAACTTCTGCTTTAGGCTCCTTCCTTTTTGCCGAGCAGCTTCACCTGGGCAGTATCATTGGAGCTATCATTATCGCATTGGGTCTGTACTCTGTGGTGTGGGGCAAAGGCAAAGACTATTCAAACCCCACGCCATCATCACCTACAACAAAGCACACAGAGACACAACAGCTGCCAATTACCTCATCTGATATCTAA 1098 0.4536 MEEICCCASFGKKFTKAKPYLLTIGLQFGFAGAYIFSVASLNHGMNRYVFVVYRNAIAALALAPFALIFERKIRPKITLPVFLQIVALGFVEPVIDQGFTFLGMQYTSASFASAIMNAVPSVTFVLAVILRLERVNVKEVRSLAKVIGTLVTFSGALLMTLYKGPQIKLFFSPNTTHHQDGSHSPQVIKHWLSGTLFLLLGCVAWSSFFILQSITLKRYPAELSLSSLVCLSGALQASVVAILATRHSGLAAWALGWDFRLYGPLYTGIVTSGITYYAQGLVLQTRGPVFLTAFNPLCMVITSALGSFLFAEQLHLGSIIGAIIIALGLYSVVWGKGKDYSNPTPSSPTTKHTETQQLPITSSDI 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01231 365 Pfam EamA-like transporter family 19 160 IPR000620 GO:0016020
Pumo10g01231 365 Pfam EamA-like transporter family 193 333 IPR000620 GO:0016020
Pumo10g01231 365 PANTHER WAT1-RELATED PROTEIN 19 340 IPR030184 GO:0016020|GO:0022857
Pumo10g01231 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Pumo10g01231 365 MobiDBLite consensus disorder prediction 341 365 - -
Pumo10g01231 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01231 Pumo-Chr10 16137382 16142489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01231 11 364 Nodulin-like Gene Family AT4G08300 48.315 1.39e-124 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01231 - - gmx:100812537 685.256