Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01230 ATGAGTAGTGCCGAAAAACTGATTGGCAGATTACGCCTATTTTTCACTAATGCAAAACCATACCTCTTAATGATTGGCTTGCAATTTGGCATGGCCGGAAATTACATCTTCGGCAAGGCTATTCTTAACCATGGCATGAGTCGTTTTGTGTTCATTGTTTACAGAAATGCTATGGCCACAATTGCCCTTGCCCCTTTTGCATTCATTATTGAAAGGAAAAGTAGGCCTAAGATGACGCTTCCAGTCTTTCTACAAATATTAGTCCTGGGATTCCTTGAGCCAGTTTTTAATCAAAGCTTCACTTACTTGGGGATGAAGTATACTTCGGCTTCATTCACATCTGCTATTGTGAATGCTGTGCCCTCTATCACCTTTGTGCTTGCAGTCATCGTCCGGTTGGAGCGTCTAAAACTTATGGAGGTTCGGAGTCAAGCCAAAGTGATTGGAACATTAGTAACGTTTGGAGGTGCTTTGCTAATGGCAATTTACAAAGGTCCTGCATTCAACCTTTTTCATTCTGGAAGCACAACCCACCATGAAAGTGGAAGCACTTCCTCTCACAACAACCATCAAATGGCTGGTGCTGTTTATATACTAATGGGTTGTGTGGCTTTGTCGTCTTTCTACATTTTGCAGTCCATAACGGTAAAAAGATACCCTGCGGAGCTATCATTGGCAGCGTTGATATGCCTGGCGGGAACAGTGGAAACAACTGCAGTGGCACTTGTGGCTGAGCGTCACTCCACTGCTTGGGCTGTTGGTTGGGATTATAGGCTCTATGCTCCGTTTTACACGGGAGTAGTTAGTTCAGGAATTGCATACTATGTTCAAGGGCTGGTGATGAAACTAAGAGGCCCTGTATTTACAACAGCCTTTAATCCTCTTTGCATGATCATTGTTACTGGTTTAGGCTCCCTTATATTAGGAGAACAACTCCATCTCGGAAGTATCATTGGAGGTATTATCATCGCATTGGGCCTTTACTCAGTTGTGTGGGGCAAAGCCAAGGACTATTCAGAACCCAAATTACCATCATCAGATGCAGAAGACACAAAATCACTGCCAATTACTGCAACTGATGATTCCAAATTTGATATTATTTCTGGGAATTTGGAAAAACAGCCATCAACCAAGCAGAAATTAGAGGAGACCAACAAAGTGGGGGAAGAAACAGAGCTGAATGTTGTGAAGGTTTAA 1197 0.4286 MSSAEKLIGRLRLFFTNAKPYLLMIGLQFGMAGNYIFGKAILNHGMSRFVFIVYRNAMATIALAPFAFIIERKSRPKMTLPVFLQILVLGFLEPVFNQSFTYLGMKYTSASFTSAIVNAVPSITFVLAVIVRLERLKLMEVRSQAKVIGTLVTFGGALLMAIYKGPAFNLFHSGSTTHHESGSTSSHNNHQMAGAVYILMGCVALSSFYILQSITVKRYPAELSLAALICLAGTVETTAVALVAERHSTAWAVGWDYRLYAPFYTGVVSSGIAYYVQGLVMKLRGPVFTTAFNPLCMIIVTGLGSLILGEQLHLGSIIGGIIIALGLYSVVWGKAKDYSEPKLPSSDAEDTKSLPITATDDSKFDIISGNLEKQPSTKQKLEETNKVGEETELNVVKV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01230 398 MobiDBLite consensus disorder prediction 338 357 - -
Pumo10g01230 398 Pfam EamA-like transporter family 19 160 IPR000620 GO:0016020
Pumo10g01230 398 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Pumo10g01230 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 335 - -
Pumo10g01230 398 PANTHER WAT1-RELATED PROTEIN 19 338 IPR030184 GO:0016020|GO:0022857
Pumo10g01230 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01230 Pumo-Chr10 16109005 16114582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01230 12 384 Nodulin-like Gene Family AT2G37460 48.541 5.37e-127 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01230 - - gmx:100786326 680.633