Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01221 ATGGAAATAGACATGGACATAGATGCTATCCACAACCTCGACTTCTCCGGATACAGCACCATCACCAACACCACCCCCTCTTCCGACGATGACTACGGTTGCAACTGGAACCACTGGTCCCCCCTCGTCAACTGGGACGCGTTCACCGGCGCCCACGACGACTTCCACCAAATCATCGACTCCATCATTTGCGATGGCGCCGCAGCGGAGGACAACCTCAGCCCCGACGACCATGGCGCCAGCAACTCCCCCTCCGCCTCCATCACGGAGGAAGACGACAACGAGGAAGAAACCGCCGGCGGCGACGATTCCAAGGGCTTGAGACTGGTCCATCTCCTCATGGCCGCCGCGGAGGCCCTGACCGGCGCCGGCGCCACGAAGAGCCGCGACCTGGCTCGAGTGATATTGGTTCGGCTCAAGGAGTTGGTGTCCCACGCGGCGCACGGCTCCAACATGGAGAGGCTCGCCGCGTACTTCACCGACGCGCTGCAGGGCCTGCTAGAAGGCGCCGGGGGTGCGCACAATAACAAACATAACTACAACTACAACTACAACAGCATCACGTCATGTGGGCCCCACCAACAGCACCGCGACGATCATCATCAAAACGACACCCTCGCGGCGTTCCAACTGCTCCAGGACATGTCTCCCTACGTCAAGTTCGGACACTTCACCGCCAACCAGGCCATCCTCGAGGCCGTGGTCCACGAGCGCCGTGTCCACATCGTCGATTACGACATCATGGAAGGGGTCCAGTGGGCCTCCCTCATGCAGGCCCTCGCCTCCAACAAAACAGGCCCACCGGGCCCACACCTTCGAATAACCGCATTGTCACGCACCGGCACCGGACGCCGCTCAATCGCCACCGTTCAAGAAACCGGACGGCGCTTGACGGCGTTCGCCGCCTCCCTCGGCCAACCGTTCTCTTTCCACCAGTGCAGGTTGGACCCCGACGAAACGTTTAAACCTTCGTCTCTGAAGCTGGTTCGCGGAGAGGCTTTGGTTTTTAACTGCATGCTAAACTTACCGCACCTTAGTTACCGTGCGCCCGATTCGGTTGCGTCGTTTTTGAGCGGAGCCAAAGCGTTAAAGCCGAGGCTGGTGACGTTAGTGGAGGAGGAGGTGGGGTCCAGTGTTGGAGGGTTCGTGGGACGGTTCATGGACGCGCTGCATCACTATTCAGCGGTGTTTGACTCGCTGGAGGCTGGGTTTCCGATGCAGGGCCGGGCCAGGGCACTTGTGGAGCGGGTTTTCTTGGGCCCGAGAATAGTGGGCTCGCTGGGCCGGATATACCGGACGGGGGAAGAGGAGGAGAGAGGGTCGTGGGGGGATTGGTTGGGTGCGGCGGGGTTCAGGGGAGTTCCGATGAGCTTCGCGAATCATTGCCAAGCGAAGCTGTTGCTGGGTCTTTTCAACGACGGGTATAGGGTGGAGGAGTTGGGGACTAATAAGTTGGTTTTGGATTGGAAATCTAGACGTTTGCTTTCTGCCTCGCTTTGGACTTCTTCCTCCGACTCAAATTAA 1524 0.5938 MEIDMDIDAIHNLDFSGYSTITNTTPSSDDDYGCNWNHWSPLVNWDAFTGAHDDFHQIIDSIICDGAAAEDNLSPDDHGASNSPSASITEEDDNEEETAGGDDSKGLRLVHLLMAAAEALTGAGATKSRDLARVILVRLKELVSHAAHGSNMERLAAYFTDALQGLLEGAGGAHNNKHNYNYNYNSITSCGPHQQHRDDHHQNDTLAAFQLLQDMSPYVKFGHFTANQAILEAVVHERRVHIVDYDIMEGVQWASLMQALASNKTGPPGPHLRITALSRTGTGRRSIATVQETGRRLTAFAASLGQPFSFHQCRLDPDETFKPSSLKLVRGEALVFNCMLNLPHLSYRAPDSVASFLSGAKALKPRLVTLVEEEVGSSVGGFVGRFMDALHHYSAVFDSLEAGFPMQGRARALVERVFLGPRIVGSLGRIYRTGEEEERGSWGDWLGAAGFRGVPMSFANHCQAKLLLGLFNDGYRVEELGTNKLVLDWKSRRLLSASLWTSSSDSN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01221 507 Pfam GRAS domain family 109 501 IPR005202 -
Pumo10g01221 507 MobiDBLite consensus disorder prediction 70 104 - -
Pumo10g01221 507 ProSiteProfiles GRAS family profile. 100 501 IPR005202 -
Pumo10g01221 507 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 92 496 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01221 Pumo-Chr10 15957868 15959391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01221 77 502 GRAS Transcription Factor Family AT5G41920 35.402 1.23e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo10g01221 GRAS 4.2e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01221 - - gmx:100782300 808.905