Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01212 ATGAGCAAACCCAAAACTCAAAGAAAACCAACCATTACCAAACATGTCAACCAAAACCAAAACCAAGAGCCACAGAAAACTGAGAAACAACCTTCATGGGTGGTGAGAGGCCTATTGGCTTGTAGAAATGTGCAAATCCAACAACATCAGCAGCAGCAGCAGCAGAAGGAGGCAAAACCTCCCCCAGAAGCAAAAGAAAATAGGAAAAAACAGGAACAGAGAAAGCAGCTGCAAGAGGAACGAGTCTCAGAAGAAAACAGCAAGAAATGCAAGAAGCTGAAATGCTCAGGCTCTCTTTGTAACAACACCAAGATCACAGCAAAGCCTGACACAGCAACCCCAGATATCCACAAGAAAAGGTTGTCACTAAGTGGATGCAACAACGATGCTTCCAGCAGATCCATGAAAGCACCTCTTAATGAACTCAATGGAACCGTGTCAGCCTCTTCTTCTTCATTGTCAGCATCTTCAACTTCTTCTGGCGGTGGCTCTTTCAGGGGAATGCCATTCAGGAGACTCTCCGGTTGTTATGAGTGTAGAATGGTGATAGACCCAGTTCTTGGCTTCACTAGAGACCCTTCTCTCAGGAGTAGCATTTGTTCTTGCCCTGACTGTGGTGAGATCATGAAAGCTGAAAGTTTGGAACACCACCAGGCTGTCAAACATGCAGTTTCTGAACTGGGTCCAGAAGACACGAGCAAGAACATAGTTGAGATAATATTCCACTCGAGCTGGCTGAAGAAGCAATCTCCAGTGTGCAAAATAGAGCGCATCCTCAAGGTCCACAACACTCAAAAAACCATCACCAAGTTCGAAGAGTACAGAGACTCCATAAAAGCCAAGGCCACAAAACTCTCCAAGAAGCACCCTCGATGCATAGCAGACGGCAACGAGCTGCTCCGGTTCCACTGCACCTCCTTCGCATGCTCCCTGGGCCTGAACGGGTCCTCCAACTTGTGCAACTCGATACCGCAGTGCCACGTGTGCAGCATAATCAAGCACGGGTTCAAGGTCACCGGAGGAGCCGGTATCTTGACGACGGCAACGAGTGGGAATGCTCACGACAAGGCGTGTGTGGAGGAGAGTGAGGAGAAGAGGGCAATGCTGGTTTGTCGGGTGATAGCAGGCAGGGTGAAGAAGAATGCGGAAGGTGGCACTGGCATGGAGGAGTATGATTCGGTTGCTGGTGCTGTTGGGGCTTATTCTAATTTGGATGAGTTGGTTGTGTTCAACCCAAGAGCTATATTGCCTTGCTTTGTTGTAATCTATAGAGGCTTTTAA 1281 0.4809 MSKPKTQRKPTITKHVNQNQNQEPQKTEKQPSWVVRGLLACRNVQIQQHQQQQQQKEAKPPPEAKENRKKQEQRKQLQEERVSEENSKKCKKLKCSGSLCNNTKITAKPDTATPDIHKKRLSLSGCNNDASSRSMKAPLNELNGTVSASSSSLSASSTSSGGGSFRGMPFRRLSGCYECRMVIDPVLGFTRDPSLRSSICSCPDCGEIMKAESLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIERILKVHNTQKTITKFEEYRDSIKAKATKLSKKHPRCIADGNELLRFHCTSFACSLGLNGSSNLCNSIPQCHVCSIIKHGFKVTGGAGILTTATSGNAHDKACVEESEEKRAMLVCRVIAGRVKKNAEGGTGMEEYDSVAGAVGAYSNLDELVVFNPRAILPCFVVIYRGF 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01212 426 Coils Coil 67 88 - -
Pumo10g01212 426 MobiDBLite consensus disorder prediction 1 33 - -
Pumo10g01212 426 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 90 423 - -
Pumo10g01212 426 MobiDBLite consensus disorder prediction 45 86 - -
Pumo10g01212 426 Gene3D - 223 424 - -
Pumo10g01212 426 MobiDBLite consensus disorder prediction 59 86 - -
Pumo10g01212 426 MobiDBLite consensus disorder prediction 11 29 - -
Pumo10g01212 426 SUPERFAMILY ADP-ribosylation 224 425 - -
Pumo10g01212 426 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01212 Pumo-Chr10 15867517 15869655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01212 165 424 C2H2 Transcription Factor Family AT1G75710 55.137 4.78e-103 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01212 - - gmx:100817333 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01212 10 15867517 15869655 Pumo10g01212 10 15867517 15869655 ECH