Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01211 ATGGATGGGAAGCCTAACCCGGATTCCTCCTCCACGGACTTCCTCCGCCACGTTCAAGCCGCCTTGAAACGACACCGTCCTCTCGGTACAATGCAGTCCAATTGCATAAGGCCAAGGCGCACGCTACTTCCTCAAAGAAGAGTATCAAACACTTCTTCTTCTTCTTCTTCTTCTTCCGATGTCACCAATTCTCAAGAAGAAGCTTCTTCCAAGGATTCGCTTAACACACTCGTCCCTTCTCAAAACCTAGACGCTCAGAAGAAAGTCCAGTTTTCAGTTCGAAGCAGCACTGCCTCGCAGGATGGAAAGGCCACTGAGTTGGAGAATTTATCTTCTCACATGAGTTCGCTTGGATTCGCAGAAATGGAGTGGGTTGAAGGCAGCCAAATTGAAGCATCATCATCATCATCACTTGGATGCAACCAGCAGGCTGGGTTTGACTGTAGTTTGAGATGTGAGAGTGGAGTGAGTTCCGTGTTACCGAAGAGAAGCGTGGCTACTCAGGATCATTTGCAGCAATTCAGAAGTTTTTTGAGTCAGCCAGCGACGCAATCTTCAGTTGTGGGACCTTCTTGTGCTACAACCACCTCGGTTCATTCAACTTCAGCGCCCATACTGAATTCAACAACAAGGTATTCTCGTTCACATCAAGATGGTGGCTCAAGTGTGGCTGCTGAGCCTTTGGGGGAGGTTAATGTTAATCATCGTCCTATAACTGAAGGGGCTGTGAAATCGGTTGATGTTTCCATAAAAGAAACCAATAGAATGTCGGTTGATCGGGGGACAGAAGCTGAAGTCCAAGCTTCTGGTGCTTGTATTGATGATGCAGGGTTGTTATCTAAGGAGGGCAATCGATCTAAGGAGCAACAAGGGGGTGTGTTGAAAGAATCTGGCAATTCTAAATATACTTCTTGTGATGATGGGAAAGGGAAAGAGGCTGTGGATGTTGCCACTGTACAACCGCAGGCTCCACTTCCCACAACCACAACCTCATCTTCAGATGTGAAGTTGGAGTCTTCTAAGGTAGAAAAACGAGAGAAGGCTGCAAGCAGTAAAGTTGCATCGGCTGCCCGGAAAAGAACTTATGATCCTGATTTGTTTTTCAAAGTCAACGGCAAGCTTTATCAGCGTCTCGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTGCACAAGGTGATTTCATCGGACTGTAGGATATATGCACTTAAAAAGATCAAGCTCAAGGGTCGTGATTATGCTACTGCATATGGGTTTTGTCAAGAGATTGAGTATCTAAATAGGCTGAAGGGAAAGGATAACATCATACAGCTTATAGATTATGAGGTGACTGACAAGGCTTTGCTTGAGGAAGTTATGAAAGGCTCCTTCAGTAATAAAGATGGCCGGGTCAAGGATGATGGATGTATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCACATGTTGTCTCAGAAGTGGAAGGAACTGGATGGAAACAACCAAACTATAGACGAGAACTGGCTTAGATTTTATTGGCAGCAAATTCTTCTAGCTGTCAACACTATTCATGAGGAACGGATTGTGCACTCAGACTTGAAGCCAGCTAACTTCCTCCTTGTCAAAGGTTCCCTAAAACTGATTGATTTTGGTATAGCCAAAGCAATAATGAGTGACACAACCAACATCCAACGGGATTCACAGGTGGGCACTCTAAGTTACATGTCTCCAGAAGCATTTTTGTGTAATGAGACTGATGCGAATGGAAACATCATAAAGTGTGGTCGACCATCGGATATCTGGTCCCTGGGCTGCATCCTTTATCAAATGGTATATGGGAGGACACCTTTTTCTGATTACAAGACATTTTGGGCCAAATTCAAAGTTATAACAGATCCAAATCACGAAATTACGTATGAACCAGTTTCAAACCCATGGCTTTTGGATCTTATGAAGAGGTGTCTAGCATGGGATCGCAATCAAAGGTGGAGAATTCCTCAGCTACTCCAACATCCTTTTCTTGTTCCTCCTGTACCATCTCATCCATCTTTGCCCCAAGATCATAGCTGTAAATTGCTACAACTTATTTCTGAAACTTGTACATATGACCCAGAAGCATCCCAACTCTGTAGTCGGCTCCAACGGCTTCTTAGTGACCCACTTGAGAAAACAACTCGCTCACTAAATTCACGAGATCAACAACTAAAACTGCTGTCCCAAATGTCAGAACTCTGTATTCAGCTGCACGAACGTTTGACAAATACTGAAAACAAATAG 2259 0.4431 MDGKPNPDSSSTDFLRHVQAALKRHRPLGTMQSNCIRPRRTLLPQRRVSNTSSSSSSSSDVTNSQEEASSKDSLNTLVPSQNLDAQKKVQFSVRSSTASQDGKATELENLSSHMSSLGFAEMEWVEGSQIEASSSSSLGCNQQAGFDCSLRCESGVSSVLPKRSVATQDHLQQFRSFLSQPATQSSVVGPSCATTTSVHSTSAPILNSTTRYSRSHQDGGSSVAAEPLGEVNVNHRPITEGAVKSVDVSIKETNRMSVDRGTEAEVQASGACIDDAGLLSKEGNRSKEQQGGVLKESGNSKYTSCDDGKGKEAVDVATVQPQAPLPTTTTSSSDVKLESSKVEKREKAASSKVASAARKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCRIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLEEVMKGSFSNKDGRVKDDGCIYMVLEYGEIDLAHMLSQKWKELDGNNQTIDENWLRFYWQQILLAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFLCNETDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSDYKTFWAKFKVITDPNHEITYEPVSNPWLLDLMKRCLAWDRNQRWRIPQLLQHPFLVPPVPSHPSLPQDHSCKLLQLISETCTYDPEASQLCSRLQRLLSDPLEKTTRSLNSRDQQLKLLSQMSELCIQLHERLTNTENK 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01211 752 FunFam serine/threonine-protein kinase mph1 isoform X1 489 671 - -
Pumo10g01211 752 SUPERFAMILY Protein kinase-like (PK-like) 369 679 IPR011009 -
Pumo10g01211 752 Pfam Protein kinase domain 375 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01211 752 ProSiteProfiles Protein kinase domain profile. 375 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01211 752 MobiDBLite consensus disorder prediction 321 336 - -
Pumo10g01211 752 PANTHER MIXED LINEAGE PROTEIN KINASE 50 702 - -
Pumo10g01211 752 MobiDBLite consensus disorder prediction 34 78 - -
Pumo10g01211 752 MobiDBLite consensus disorder prediction 21 78 - -
Pumo10g01211 752 FunFam serine/threonine-protein kinase mph1 isoform X2 368 455 - -
Pumo10g01211 752 Gene3D Phosphorylase Kinase; domain 1 368 454 - -
Pumo10g01211 752 Gene3D Transferase(Phosphotransferase) domain 1 489 671 - -
Pumo10g01211 752 SMART serkin_6 375 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01211 752 CDD PKc_Mps1 373 668 IPR027084 -
Pumo10g01211 752 MobiDBLite consensus disorder prediction 279 343 - -
Pumo10g01211 752 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524
Pumo10g01211 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Pumo10g01211 752 MobiDBLite consensus disorder prediction 283 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01211 Pumo-Chr10 15855734 15860378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01211 381 669 MAP Kinase Kinase Kinase AT4G08470 29.352 1.50e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Pumo10g01211 Pkinase 2.1e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01211 K08866 - gmx:100788990 1328.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01211 10 15855734 15860378 Pumo10g01211 10 15855734 15860378 ECH