Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01210 ATGGATGTTTCACTACAACTAATGTCCTTAGCAGGTGCTCGCGTTGCCAACTTGCATACTATTGTGGAACAGCATGTCAGAGGTCAGAGTGGAAGCTGCATCGTCTTGAGTGTGAGGTCCCTCTCCAGGCTGGACAAGGACAAGAGGAAATCTGTCACACCATCCATACGGCTGATGGTGAGACTTTATCTTCGGAGGAAGTTGCAAAATGATAAGATCATCCCAAGCACTGCAATGGACAACTACAACTTGGTGGAGGCATTAGTGGCTCACATGTCTGACATCACAGAGGAGCAGCTGGTGCTTTATGTACAGATGGCTAATCTTGTAAACTCCATACTACAATGGCCAGAAATCAATATAAAAGAGATTGCAGAAAATTTTTCTAAGTTTGCATGTAATGCGCATACCATCTGTGACAGTGAGTTGAGACCTGTGGGAACAGGATTGTATCCTGTTATTTCCATCATCAATCACAGCTGTTTGCCCAATTCTGTGTTGGTTTTTGAGGGAAGGTCAGCTTTGGTACGTGCTGTGCAGCATATACCCACAGGTACTGAGGTGCTGATAAGTTATATAGAGACTGCTGGAAGCACTATGACTCGACAGAAGGCTCTCAAAGAGCAGTACCTATTCACTTGTACATGTCCTCGCTGTTCTAAAGTGGGTCAGTATGATGATATCCAAGAAAGTGCAATTCTAGAAGGATACAAATGCAAAAGTGAAAAATGTGGTGGTTTCTTGCTTCGTACAACTGATGGGAAAGGATTCCAATGCCAAGGTTGTGGACTAGTTAGGGACAAGGAGGAGATAAAGAGAATTACAACTGAAATTAAATTGCTATCTGAAGAAGCTTCTAAGCCCTCTTCCACTTGCAATTATCAAGAAGCTATTTCCATATATAAAAGGATTGAGAAGCTGCAAACAGAACTCTATCATCCATTATCAATCAACTTGATGCAAACTAGAGAGAAGATTTTGAAGTCACTAATGGAGCTGGAACACTGGACAGAAGCTTTAGCATATTGCAAATTGACCATACCATTCTATCAAAGAGTGTATCCAGCTGTTCATCCTCTGCTTGGCTTGCAATATTATACTTGTGGAAAACTAGAATGGTATCTGGGAGACACAGAGGAAGCTGTTAAATCACTGACGAAGGCCGTGGATATACTACGGATTACTCATGGCACAAATACACCTTTCATGAAGGACCTCTTGATGAAGTTGGAAGAAGCCCGTGCCGAAGCGTCTTACAAATTGTCCTCTAAAGAGTAG 1278 0.4233 MDVSLQLMSLAGARVANLHTIVEQHVRGQSGSCIVLSVRSLSRLDKDKRKSVTPSIRLMVRLYLRRKLQNDKIIPSTAMDNYNLVEALVAHMSDITEEQLVLYVQMANLVNSILQWPEINIKEIAENFSKFACNAHTICDSELRPVGTGLYPVISIINHSCLPNSVLVFEGRSALVRAVQHIPTGTEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCSKVGQYDDIQESAILEGYKCKSEKCGGFLLRTTDGKGFQCQGCGLVRDKEEIKRITTEIKLLSEEASKPSSTCNYQEAISIYKRIEKLQTELYHPLSINLMQTREKILKSLMELEHWTEALAYCKLTIPFYQRVYPAVHPLLGLQYYTCGKLEWYLGDTEEAVKSLTKAVDILRITHGTNTPFMKDLLMKLEEARAEASYKLSSKE 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01210 425 Coils Coil 264 284 - -
Pumo10g01210 425 SUPERFAMILY SET domain 130 220 IPR046341 -
Pumo10g01210 425 ProSiteProfiles SET domain profile. 11 193 IPR001214 GO:0005515
Pumo10g01210 425 Pfam SET domain 96 192 IPR001214 GO:0005515
Pumo10g01210 425 Gene3D SET domain 136 219 IPR046341 -
Pumo10g01210 425 Coils Coil 407 425 - -
Pumo10g01210 425 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 41 412 - -
Pumo10g01210 425 Gene3D Tetratricopeptide repeat domain 346 423 IPR011990 GO:0005515
Pumo10g01210 425 Gene3D - 51 135 - -
Pumo10g01210 425 SUPERFAMILY TPR-like 291 391 IPR011990 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pumo10g01210 SET 3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01210 K11426 - gmx:100789518 736.487