Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01202 ATGGTTGGATGCATTGAAGTTTCACTGCTTGATCAAGGGACTCAAGGAAAGCAAAGTGTTTATCAACTGGAGCAGGAAATAGCACTTTTGAGTCAGTTTGAGCATGAGAATATTGTTCAATACTATGGCACAGAAATGGATGAATCAAAGCTGTATATCTTTCTTGAGCTTGTAACCAAAGGTTCCCTTCGAAGCCTCTATCAGAAGTATACTCTTCGAGATTCCCAAGTATCTGCCTATACAAGACAGATTCTGCATGGTTTGAAGTATCTTCATGATCGAAATGTGGTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAGTGGATCTGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCAACCAAATTGAATGACGTTAAATCAATGAAGGGGACAGCATTCTGGATGGCCCCTGAGGTTGTAAAAGGAAAGAACAAGGGTTATGGACTTCCAGCTGATATGTGGAGTCTGGGATGCACTGTACTGGAGATGTTAACAGGCAAACTTCCGTACTGTGATTTGGAATGTATGCAGGCATTATTTAGAATTGGAAAAGGTGAGCGACCTCCTATTCCTGACTCTCTTTCGAGAGATGCACGGGATTTTGTCCTGCAGTGCCTTCATGTTAATCCAAATGATCGTCCCACTGCTGCTCAACTTTTAAACCATTCGTTTATCCAAAGGCCACTTTCCCAATCCTCTGGTTCTTCATATCCTCATATTCATGGCCGGAAGGGTTAA 753 0.4183 MVGCIEVSLLDQGTQGKQSVYQLEQEIALLSQFEHENIVQYYGTEMDESKLYIFLELVTKGSLRSLYQKYTLRDSQVSAYTRQILHGLKYLHDRNVVHRDIKCANILVDASGSVKLADFGLAKATKLNDVKSMKGTAFWMAPEVVKGKNKGYGLPADMWSLGCTVLEMLTGKLPYCDLECMQALFRIGKGERPPIPDSLSRDARDFVLQCLHVNPNDRPTAAQLLNHSFIQRPLSQSSGSSYPHIHGRKG 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01202 250 ProSitePatterns Serine/Threonine protein kinases active-site signature. 96 108 IPR008271 GO:0004672|GO:0006468
Pumo10g01202 250 SMART serkin_6 4 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01202 250 ProSiteProfiles Protein kinase domain profile. 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01202 250 SUPERFAMILY Protein kinase-like (PK-like) 16 233 IPR011009 -
Pumo10g01202 250 FunFam Mitogen-activated protein kinase 1, putative, expressed 1 242 - -
Pumo10g01202 250 PRINTS Tyrosine kinase catalytic domain signature 199 221 IPR001245 GO:0004672|GO:0006468
Pumo10g01202 250 PRINTS Tyrosine kinase catalytic domain signature 135 145 IPR001245 GO:0004672|GO:0006468
Pumo10g01202 250 PRINTS Tyrosine kinase catalytic domain signature 55 68 IPR001245 GO:0004672|GO:0006468
Pumo10g01202 250 PRINTS Tyrosine kinase catalytic domain signature 90 108 IPR001245 GO:0004672|GO:0006468
Pumo10g01202 250 PIRSF ILK 4 236 - -
Pumo10g01202 250 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 6 238 - -
Pumo10g01202 250 Pfam Protein kinase domain 17 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01202 250 Gene3D Transferase(Phosphotransferase) domain 1 5 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01202 Pumo-Chr10 15669997 15675144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01202 6 234 MAP Kinase Kinase Kinase AT4G08500 70.000 5.61e-115 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pumo10g01202 Pkinase 5.8e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01202 K13414 - gmx:100819999 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01202 10 15669997 15675144 Pumo10g01202 10 15669997 15675144 ECH