Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01192 ATGCCTCGCCAACCGCCGCCGTCTCCGCCGTCGCAGCCGGGCGTTCTGGACCCCAAAATCTGGCGAGCCATCGCCGGATTGCCCGTGGAAATCCCTACGCTCCATTCTAGGGTTTACTACTTCCCTCAGGGACACCTCGATCAAGCCTCTTCCCTTCCGAGAAACCTCTCCCATCGCCTTCTCTCAAAACCCGTCGTTCTCTGCCGCGTCGCCTCCGTTCAATTCCTCGCCGATCCTCTCACCGACGAGGTTTTCGCGAAGCTTATTCTCCACCCTATCGCTGATTACTTCGCCGGCGGGACCCTCTGCTGTTGCTGCTCCTGCTCCTGCTCCGCCTCAAAACGACGAGAATAA 354 0.5932 MPRQPPPSPPSQPGVLDPKIWRAIAGLPVEIPTLHSRVYYFPQGHLDQASSLPRNLSHRLLSKPVVLCRVASVQFLADPLTDEVFAKLILHPIADYFAGGTLCCCCSCSCSASKRRE 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01192 117 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 92 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01192 Pumo-Chr10 15555752 15556105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01192 16 94 B3 DNA Binding Superfamily AT1G77850 54.217 4.52e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01192 - - gmx:102662128 158.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01192 10 15555752 15556105 Pumo10g01192 10 15555752 15556105 ECH
Pumo9g01292 9 38252397 38256867 Pumo10g01192 10 15555752 15556105 PCT