Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01136 ATGGATAAGCTGTGCTGTTTTAAGGCTTCCTACTCTCAGCTTGTAGCAGCACGTTCTTCATCCAGCACTGGTAAGGGGAAAAATCATGAAGGCTCAATAAAGTATGGTTTCAGTCTTGTAAAAGGGAAAGCTAATCACCCAATGGAGGATTACCATGTTGCCAAGTTTGCGCAGATAAAGGATAATGAATTGGGTTTATTTGCTATTTATGATGGCCACTTGGGTGACCGTGTGCCTGCTTACTTACAGAAACATTTGTTTACCAACATTTTGAGGGAGGAGGAATTTTGGGAGGACCCCACTCTTTCTATCTCAAAAGCATACGAGAGCACAGATCAGGAAATTCTATCACACAGTTCTGATCTTGGACGTGGTGGATCAACGGCAGTAACTGCTATTTTGATCAATGGACGAAGGTTATGGATAGCTAATGTTGGAGACTCACGAGCTGTTCTTTCAAGAAAAGGTCAAGCTGTACAAATGACTACAGACCATGAGCCTAACATGGAACGAGGCAGCATTGAGACTAGAGGTGGTTTTGTCTCTAATCCTGCCAGGTGA 561 0.4314 MDKLCCFKASYSQLVAARSSSSTGKGKNHEGSIKYGFSLVKGKANHPMEDYHVAKFAQIKDNELGLFAIYDGHLGDRVPAYLQKHLFTNILREEEFWEDPTLSISKAYESTDQEILSHSSDLGRGGSTAVTAILINGRRLWIANVGDSRAVLSRKGQAVQMTTDHEPNMERGSIETRGGFVSNPAR 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01136 186 Gene3D - 12 186 IPR036457 -
Pumo10g01136 186 ProSiteProfiles PPM-type phosphatase domain profile. 34 186 IPR001932 -
Pumo10g01136 186 PANTHER PROTEIN PHOSPHATASE 27 182 IPR015655 GO:0004722|GO:0006470
Pumo10g01136 186 CDD PP2Cc 33 184 IPR001932 -
Pumo10g01136 186 Pfam Protein phosphatase 2C 43 183 IPR001932 -
Pumo10g01136 186 SMART PP2C_4 30 186 IPR001932 -
Pumo10g01136 186 SUPERFAMILY PP2C-like 32 184 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01136 Pumo-Chr10 14607147 14609322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01136 1 183 PP2C-type Phosphatase Gene Family AT1G34750 75.410 3.06e-102 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01136 K17506 - gmx:100797292 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01136 10 14607147 14609322 Pumo10g01136 10 14607147 14609322 ECH