Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01100 ATGGCAGGAGAATCAGTGACGTTAATAGGGTTCTGGGGTAGTCCTTTTGTCCTCAGGGTCAAGTGGGCTCTTGAACTAAAAGGGATTCAGTACCAATATGTGGAAGAAGATCTCAGCAACAAGAGTGCCATGCTCCTACAGTATAACCCTGTCTACAAGAAGGTACCGGTTCTTGTGCATGACGGCAGGCCCCTGGCAGAATCACCAGTGATTCTTGAGTATATTGATGAGACCTGGAAGCAAGATCCCTCCCTTCTTCCACATGACCCCTATGAAAAGGCCAAGGCACGATTCTGGTCCAGATTCGTTGATGAAAAGTGTGTGCCAGCTGTTATGGCCACCTTTTCCAAAGGAGGGGAGGAACAACAGAAGGCAGCACAAGAAGCTCGAGAGAATCTGAAGACCCTTGAAGGTGGCTTAGAGGGAAAGCACTACTTTGGAGGTGAAAAAGTAGGCTTCGCTGATATTGCTATTGGCTGGCTTGGATACTGGGTACGAATAGTGGAGGAAATTGTGGGCATAAACCTCATTGATAAAGAGTTGATGGCTAAGCTTGATGCTTGGTTCGATGATTTTCTTGAGCTTCCTGTTATCAAAGAATGCATGCCGCCTCATGATAAACTGCTTAACCACAACAAGGCCTTCCACAAGCTCTTGACATCTTCATCCACTTGA 675 0.4667 MAGESVTLIGFWGSPFVLRVKWALELKGIQYQYVEEDLSNKSAMLLQYNPVYKKVPVLVHDGRPLAESPVILEYIDETWKQDPSLLPHDPYEKAKARFWSRFVDEKCVPAVMATFSKGGEEQQKAAQEARENLKTLEGGLEGKHYFGGEKVGFADIAIGWLGYWVRIVEEIVGINLIDKELMAKLDAWFDDFLELPVIKECMPPHDKLLNHNKAFHKLLTSSST 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01100 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Pumo10g01100 224 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Pumo10g01100 224 Gene3D Glutaredoxin 2 85 - -
Pumo10g01100 224 FunFam Tau class glutathione S-transferase 86 222 - -
Pumo10g01100 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 209 IPR045073 -
Pumo10g01100 224 Pfam Glutathione S-transferase, C-terminal domain 109 196 IPR004046 -
Pumo10g01100 224 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Pumo10g01100 224 SUPERFAMILY GST C-terminal domain-like 77 218 IPR036282 -
Pumo10g01100 224 FunFam Tau class glutathione S-transferase 1 87 - -
Pumo10g01100 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 215 IPR010987 -
Pumo10g01100 224 CDD GST_C_Tau 90 215 IPR045074 GO:0004364|GO:0006749
Pumo10g01100 224 Gene3D - 86 223 - -
Pumo10g01100 224 SFLD Main (cytGST) 2 221 - -
Pumo10g01100 224 SFLD Main.3: Omega- and Tau-like 2 221 IPR045073 -
Pumo10g01100 224 CDD GST_N_Tau 6 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01100 Pumo-Chr10 14100248 14101011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01100 4 222 Glutathione S-transferase Gene Family AT3G09270 49.545 1.23e-71 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01100 K00799 - gmx:100813267 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01100 10 14100248 14101011 Pumo10g01100 10 14100248 14101011 ECH