Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01098 ATGAGGAAGAAAAGGAAAGGAAGCGAGACTGATGCGTCTGCGGATCTGGCTGTTATTTTGGCTTCTAATCATGGCTCTGCTTCTTCGAATTTGAAGTCCCATTACTCGCTAGAGGATTGTTCTAGGCTGAAGAAGAGGTGTTGTAAGGAGGAGGATGTTGACACTGAGCCAGCTGCTTCCTTTAAGAGGAGGCTTGCTGGCATTGCTACTGCCCCGCCTTGTGGAACGTCGTCTTTGATCACGCCGGGGAGAGGGCTCAAGAGGAAGATAGGTTGCATTGATGTTGCTACCCAGATGGGCAGGAAGAAGAAGATTGAGGATGATTATGTGTCTGGTGAGACGATTGGGCAAGGCAAGTTCGGGTCTGTTTGGTTGTGTCGGTCGAGGGTTAGTGGAGCAGAATATGCGTGTAAGACGCTGAGGAAGGGGGAGGAGACGGTTCATCGAGAGGTTGAGATCATGCAACACTTGTCTGGACATTCTGGGGTTGTGACACTGCAAGCTGTTTATGAGGAAGCTGAATGCTTTCATCTTGTGATGGAATTGTGCTCTGGGGGACGACTCATTGATCGGATGGTTAAGGATGGTCCGTATTCAGAACAGCGGGCTGCTAATGTACTCAAGGAAGTGATGTTGGTCATCAAGTATTGTCATGACATGGGAGTTGTGCACAGAGATATCAAACCTGAGAATATTCTGCTCACGGCATCTGGAAAAATAAAGCTTGCAGATTTTGGCTTGGCCATGAGAATTTCAGAAGGTCAAAACTTGACTGGTTTGGCTGGAAGCCCTGCCTATGTTGCCCCAGAAGTATTGTTAGGCAGATACTCTGAGAAGGTGGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGCAGTCTTCCATTTCAAGGAGATTCATTGGAAGCAGTTTTTGAGGCTATTAAGACCGTCAAATTAGATTTCCAAAATGGAATGTGGGAATCAATATCTAAGCCTGCACGAGACCTTATTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATATCAGCTGACGAAGTACTTAGGCATCCATGGATATTGTTCTACACGGCACATTCATTGACAATGCTGCCCATCAAAACAAAATTGAAGAACCAAATTGGTTCCGCATACCAACAGCTTGTTGCTGTTCCTGAACCAGGATTAGGAGGAAATAGGATAGGTAATTACTCACTTAGCGAGGGTTCACGGTCATCCTCTGAAAGTTGCAACTCAGATGATCAGGATGAATGTGTGTTGATTGACGTGCTCGCCTCTGCAATTTCACATGTGAGGATATCTGAACCAAAGAGGAGCAGGTTGTGTGGTCCCACAGGTCCAATAGTTCAGCAAAGTTCATCTAACATGAAGCCTAACAACCTCTGTAAAGCATTTTGA 1410 0.4617 MRKKRKGSETDASADLAVILASNHGSASSNLKSHYSLEDCSRLKKRCCKEEDVDTEPAASFKRRLAGIATAPPCGTSSLITPGRGLKRKIGCIDVATQMGRKKKIEDDYVSGETIGQGKFGSVWLCRSRVSGAEYACKTLRKGEETVHREVEIMQHLSGHSGVVTLQAVYEEAECFHLVMELCSGGRLIDRMVKDGPYSEQRAANVLKEVMLVIKYCHDMGVVHRDIKPENILLTASGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLLGRYSEKVDIWSAGVLLHALLVGSLPFQGDSLEAVFEAIKTVKLDFQNGMWESISKPARDLIGRMLTRDISARISADEVLRHPWILFYTAHSLTMLPIKTKLKNQIGSAYQQLVAVPEPGLGGNRIGNYSLSEGSRSSSESCNSDDQDECVLIDVLASAISHVRISEPKRSRLCGPTGPIVQQSSSNMKPNNLCKAF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01098 469 ProSiteProfiles Protein kinase domain profile. 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01098 469 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Pumo10g01098 469 SMART serkin_6 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01098 469 MobiDBLite consensus disorder prediction 449 469 - -
Pumo10g01098 469 FunFam Serine/threonine-protein kinase PEPKR2 100 424 - -
Pumo10g01098 469 Pfam Protein kinase domain 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01098 469 PANTHER SERINE/THREONINE-PROTEIN KINASE 96 371 - -
Pumo10g01098 469 MobiDBLite consensus disorder prediction 446 469 - -
Pumo10g01098 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Pumo10g01098 469 CDD STKc_CAMK 108 356 - -
Pumo10g01098 469 SUPERFAMILY Protein kinase-like (PK-like) 100 374 IPR011009 -
Pumo10g01098 469 Gene3D Transferase(Phosphotransferase) domain 1 100 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01098 Pumo-Chr10 14094205 14097503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01098 101 357 EF-hand Containing Proteins AT4G35310 44.569 1.56e-78 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo10g01098 Pkinase 2.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01098 - - gmx:100812729 875.544