Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01062 ATGAAGATTAAAAAGATGAGCATTGATTTTGCTGGGAAAACTGTATATACTGCAATATGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTGGGTTTCTCCACACAGAAGTGGTTGACTGCTGGTGGTTTGGGCACAGTATTGCTTTCCCTTGCAGGTCGTGAGATATTTACAAACTTCCTTTCGAGTATAATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGCGGATTCAAACAAAAATTAAAGGATATGAGGTTACTGGTAAAGTTGAGCATGTAGGCTGGTGGTCACCAACAATAGTTAGAGGTTCTGATTGTGAAGCAGTTCATATTCCTAATCACAATTTGAGTGTAAATGTTGTGAGGAATCTTAGTAAGAAATCTCATTGGCGCATCAAGACTCATCTTGCTATCAGTCACTTGGAAGTTAACAAGATTAATAGTATTATAGCTGATATGCGCAAGGTTTTGGCCAAAAATCCTCAAGTAGAGCAGAAAAAATTGCACAGAAGGGTTTTCCTAGAGAATATTGATCCAGAAAATCAGGCTCTTATGATATTAGTATCTTGCTTTGTTAAAACTTCACATTCTGAAGAGTACCTCCGTGTAAAGGAGGCAATCCTCTTGGATCTTCTCAGAGTTATCAGTCATCATCGAGCTCGGCTAGCCACACCCATCCGCACAGTTCAGAAGATGTGCAGTGATGCTGATTTAGATATTGATCCATTTGATGACACCATTTCCACTCGTTCCAGATCAAAGAAAAACCGTCCTTTCCCACTGTTAGATCCACCTTATAAAGTTAAGCCTTCAACTATTACAGATGAGGACAAAGATGCCAAGATTGATGAAACCTTGCCATCTGACTTCAAAGTAGAACATGACAAATTTGCTGCGACATCGAGTTCAGTCCAGAAGACCTCCAAATCCCAAAAGCCCAAAAAGGAAAGAGCAGGAAGTGCAGGAAGGGGAACAACATCCAAAATTTTGTCAACATCCAATGAGTTTGGTTCTGGAGAGACTACTTCACCATCAAAGCTAGATGAAGAGAAATCTGTTGTGTCATCATCATCAGTTAGTCATTCTTTGGAAGAGAATATTGTTCTTGATGCTGCCCTGCTGGGCTCAAAGAGAACTCTTCCAATTGATGAAGAATTGAATTCAATCTATCCCTGCAAAATCACAAGAAGTTGCAGTCCATCAGAATGGGAGTGA 1218 0.4023 MKIKKMSIDFAGKTVYTAIWVAAVSLFMELLGFSTQKWLTAGGLGTVLLSLAGREIFTNFLSSIMIHATRPFVVNERIQTKIKGYEVTGKVEHVGWWSPTIVRGSDCEAVHIPNHNLSVNVVRNLSKKSHWRIKTHLAISHLEVNKINSIIADMRKVLAKNPQVEQKKLHRRVFLENIDPENQALMILVSCFVKTSHSEEYLRVKEAILLDLLRVISHHRARLATPIRTVQKMCSDADLDIDPFDDTISTRSRSKKNRPFPLLDPPYKVKPSTITDEDKDAKIDETLPSDFKVEHDKFAATSSSVQKTSKSQKPKKERAGSAGRGTTSKILSTSNEFGSGETTSPSKLDEEKSVVSSSSVSHSLEENIVLDAALLGSKRTLPIDEELNSIYPCKITRSCSPSEWE 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01062 405 Gene3D - 1 70 - -
Pumo10g01062 405 Gene3D - 71 124 IPR023408 -
Pumo10g01062 405 MobiDBLite consensus disorder prediction 325 360 - -
Pumo10g01062 405 Pfam Mechanosensitive ion channel 13 220 IPR006685 GO:0016020|GO:0055085
Pumo10g01062 405 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 4 386 IPR045042 -
Pumo10g01062 405 SUPERFAMILY Sm-like ribonucleoproteins 56 126 IPR010920 -
Pumo10g01062 405 MobiDBLite consensus disorder prediction 302 360 - -
Pumo10g01062 405 MobiDBLite consensus disorder prediction 245 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01062 Pumo-Chr10 13749427 13753331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01062 4 389 Mechanosensitive Ion Channel Family AT5G10490 60.247 9.97e-156 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01062 K22047 - gmx:100797302 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01062 10 13749427 13753331 Pumo10g01062 10 13749427 13753331 ECH