Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01058 ATGAAGTCCGTCTGCAATCTTTATTCCCTCAATCCCCTCCCAAAGCATTTTATGATCCTTAGTGTTGGACTAGAGGCTAGCAATAGCACCAAATTGAGCAAGGAAATTGCAGATAGAACCCAAGAACTAAGTTGGTTGAAAGGCGACGATCTTCAAGGACTAGGTCTAAATGATTTGCAGCAACTGGAGAAAACACTTGAAATAGGACTCAATCGCGTGATTGGGATAAAGGAAAAGCAGATAATGAGTCAGATTTCTGAACTTCAGAAAAAGCTAGCGGAAACGGAGATGGAGGCTATGCTGCGTAAAGCAAAAATTCCTTTCATGGTGGAGTCAGATAAGGGAATGCAGGAAGAAGGTGTGTCATTAGATTCTACAAATAACATTAGCAGTTGCATCAGTGACCCTCCTCTCGAGGATGGTTCCTCGGACATATCTCTTAAGTTAGGGTAA 453 0.4216 MKSVCNLYSLNPLPKHFMILSVGLEASNSTKLSKEIADRTQELSWLKGDDLQGLGLNDLQQLEKTLEIGLNRVIGIKEKQIMSQISELQKKLAETEMEAMLRKAKIPFMVESDKGMQEEGVSLDSTNNISSCISDPPLEDGSSDISLKLG 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01058 150 Coils Coil 78 98 - -
Pumo10g01058 150 Pfam K-box region 28 98 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pumo10g01058 150 MobiDBLite consensus disorder prediction 127 150 - -
Pumo10g01058 150 ProSiteProfiles K-box domain profile. 22 112 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01058 Pumo-Chr10 13715957 13718829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01058 24 150 MADS-box Gene Family AT2G22540 39.189 5.93e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01058 - - gmx:100776749 199.134