Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01050 ATGCTTCCAAGCATGGCTTGCATTCACATCATCCTCCAAAGCGGAAGAATCACTTGTGGGAGTGAGAGTGCGACTTTAAAGTTGAACACCAACACCCGCTTTCTTTCCAGTTATGGGTTTTGGCGCCCCATGTGTTTGTTCCCTTTCACACCGCCACCACCCATCTCTCTCACTTCTCTTCCCTCCAAACCCATTCCAATTCTCATGGGCTACCTCTCTTGCAATGCCGAGTCCGCAATCGCCACCTGCGACCCTCACTTCAGGAAGAAGCACAAACCCCTCCCCGCCAAACCAATCCGAGAGTTCCACTACGCCGACATCCTCGCCGCCGCCAACGGCTTCTCCGCCGACACCTTCCTAGGTCGAGGCAGCCACGGAAGAGTCTACAGAGCCACCCTCGACGGCGGCAAGCTCCTCGCCGCCGTCAAAACCACCAAACTCGCCATCGCCACCTCCACCTCCCATCAGAACCACGCCACCAAATGCACCGGCTGCGGCAACTGCACCAGCCCCGCCGAAAACGAGATCGAGATCCTCTCCCAAGTCCCCAGCCCCCGCCTCGTCAACCTCATCGGCTTCAGCACCGACCCAAACGGCAACAAACTAATCGTCGTCGAGTACATGCCAAACGGCTCGCTCCACGATCTACTACACTCCGTTAAAAAACCGCCCGGTTGGAACCGCAGGGTTCGGTTCGCGCTTCAGGTTGCCAAAGCGGTTCGCCAATTACACTCTTCCAACCCTCCCGTTATTCACCGTGACGTCAAGTCTTCCAATGTTTTAATTGACGAAGAATGGAACGCGCGGCTCGGTGACTTCGGCTTGGCCTTAAGGGGACACGTGGAGGACGTTCGCGTCAAGTGCACGCCACCCGCGGGGACGTTAGGGTACCTCGACCCGTGCTATCTTGCGCCGGAGGATCTCAGCGCCAAGAGCGATGTCTTCAGCTTCGGGATCTTACTGTTAGAGATCATCAGCGGAAGAAACGCCATCGATGTTAATTATAGTCCTCCGTCCGTGGTGGACTGGGCGGTGCCGCTGATTAAGCACGGCGACTTCGCCGGAATCTGTGACCGGCGGATCGGACCGCCGCCGAACCCCGCCGTGGTGCGGCAGCTCGCGGTGCTGGCTGCCAGATGCGTGAGGTCGACGGCGGAGAAGCGGCCGTCGATGGCGGAGGTTGTGGAGTGTCTTAACCTGGCGAGGAAGAGGATTACGCGCGTCGCCGATTTGGAACAATCTGCGGCGGCGCGTGGAGAGCGCGCTGCCGGTGGTGGCGTGGGAGGAGGGTGA 1293 0.5909 MLPSMACIHIILQSGRITCGSESATLKLNTNTRFLSSYGFWRPMCLFPFTPPPPISLTSLPSKPIPILMGYLSCNAESAIATCDPHFRKKHKPLPAKPIREFHYADILAAANGFSADTFLGRGSHGRVYRATLDGGKLLAAVKTTKLAIATSTSHQNHATKCTGCGNCTSPAENEIEILSQVPSPRLVNLIGFSTDPNGNKLIVVEYMPNGSLHDLLHSVKKPPGWNRRVRFALQVAKAVRQLHSSNPPVIHRDVKSSNVLIDEEWNARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLIKHGDFAGICDRRIGPPPNPAVVRQLAVLAARCVRSTAEKRPSMAEVVECLNLARKRITRVADLEQSAAARGERAAGGGVGGG 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01050 430 Pfam Protein tyrosine and serine/threonine kinase 118 398 IPR001245 GO:0004672|GO:0006468
Pumo10g01050 430 ProSiteProfiles Protein kinase domain profile. 114 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01050 430 FunFam Serine/threonine-protein kinase-like protein 76 207 - -
Pumo10g01050 430 SUPERFAMILY Protein kinase-like (PK-like) 91 398 IPR011009 -
Pumo10g01050 430 PANTHER OS01G0253100 PROTEIN 90 400 - -
Pumo10g01050 430 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
Pumo10g01050 430 FunFam Serine/threonine-protein kinase-like protein 208 410 - -
Pumo10g01050 430 Gene3D Phosphorylase Kinase; domain 1 76 207 - -
Pumo10g01050 430 Gene3D Transferase(Phosphotransferase) domain 1 208 419 - -
Pumo10g01050 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Pumo10g01050 430 SMART serkin_6 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01050 Pumo-Chr10 13631560 13632852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01050 100 413 Receptor kinase-like Gene Family AT3G59420 40.125 5.91e-67 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pumo10g01050 PK_Tyr_Ser-Thr 1.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01050 - - gmx:100799382 631.713