Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01042 ATGGTAGAGGGGCTAAACAGAGAACAGTACGTGTACCTGGCGAAGCTGTCGGAGCAGGCGGAGCGGTACGAGGAGATGGTGGAGTTCATGCAGAAGGTGGTGGTGGGGTGGACGCCGGCGTCGGAGCTCACCGTGGAGGAGCGCAACCTCCTCTCGGTGGCCTACAAGAACGTGATCGGGTCGCTGCGTGCGGCGTGGCGCATCGTGTCCTCGATCGAGCAGAAAGAGGAGGGCCGCAAGAACGAGGAGCACGTGTCCCTCGTGAAGCACTACAGATCCAAGGTCGAGAACGAGCTCTCGCAGGTCTGCGCCAGCATCCTCAACCTCCTCGACTCCAACCTCGTACCCTCTGCCTCCGCCAGCGAGTCCAAGGTCTTCTATTTGAAGATGAAGGGCGATTACCACCGCTATCTCGCAGAGTTTAAGGTTGGGGATGAAAGAAAAGCCGCTGCTGAGGATACCATGTTGTCTTACAAAGCTGCCCAGGACATTGCTTATGCGGATCTTCCGTCTACTCACCCCATAAGATTGGGCCTTGCTCTCAACTTCTCGGTCTTCTACTATGAAATCCTCAACCAGTCTGATAAAGCGTGTGGCATGGCTAAACAGGCTTTTGAGGAAGCAATTGCTGAGCTGGACACCTTGGGAGAAGAATCCTACAAAGACAGCACGCTCATAATGCAGCTTTTAAGAGACAACCTCACCCTTTGGACTTCTGATGTCCAGGACCAGCTAGATGAGCCCTAA 747 0.5475 MVEGLNREQYVYLAKLSEQAERYEEMVEFMQKVVVGWTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKHYRSKVENELSQVCASILNLLDSNLVPSASASESKVFYLKMKGDYHRYLAEFKVGDERKAAAEDTMLSYKAAQDIAYADLPSTHPIRLGLALNFSVFYYEILNQSDKACGMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQDQLDEP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01042 248 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Pumo10g01042 248 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Pumo10g01042 248 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Pumo10g01042 248 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Pumo10g01042 248 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Pumo10g01042 248 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Pumo10g01042 248 FunFam 14-3-3 protein epsilon 3 248 - -
Pumo10g01042 248 Coils Coil 13 33 - -
Pumo10g01042 248 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Pumo10g01042 248 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Pumo10g01042 248 Pfam 14-3-3 protein 13 238 IPR023410 -
Pumo10g01042 248 SUPERFAMILY 14-3-3 protein 5 240 IPR036815 -
Pumo10g01042 248 Gene3D - 1 247 IPR036815 -
Pumo10g01042 248 PANTHER 14-3-3 PROTEIN 7 242 IPR000308 -
Pumo10g01042 248 PIRSF 14-3-3 1 247 IPR000308 -
Pumo10g01042 248 SMART 1433_4 7 247 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01042 Pumo-Chr10 13507581 13510163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01042 1 242 14-3-3 family AT5G10450 85.124 5.60e-154 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01042 K06630 - gmx:100818967 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01042 10 13507581 13510163 Pumo10g01042 10 13507581 13510163 ECH