Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01031 ATGAAAGGGGAATACGTAGAGCAACAACAACAGCAGCAACATCCTAAGAGTGAAACACCACCTAGTATGTTCTCAAAGCTTCAACCTCAACACCATCCTTTCCCTCACCACCCTTTCCAACTCTCCGCGGAGGACGCCGCGACCACCGCTCAGAAGGCGAACTCCTCCGGCGGCGACGGCGCTACTATTGAGGTCGTTCGGCGTCCGAGGGGCCGTCCGCCCGGGTCCAAAAACAAGCCCAAGCCACCGGTTATCATAACCCGTGACCCGGAACCCGCCATGAGCCCCTACATTTTAGAAGTGTCTGGAGGAAACGACGTCGTCGAGGCCATCGCGCAGTTCAGTCGCCGCAAGAACATGGGCATCTGCGTCCTATCCGGTTCCGGAACCGTCGCTAACGTCACGCTCCGTCAACCTTCCACTACGCCCGGCACCACCGTTACTTTTCACGGCCGTTTCGATATCCTTTCTGTCTCCGCCACCTTCCTTCCTCAACAATCGGGTGCGTCTCCGGCGGTTCCCAACGGCTTCGCCATCTCGCTCGCCGGACCGCAGGGGCAGATCGTCGGAGGACTCGTCGCCGGCGGGTTGATGGCTGCCGGGACGGTGTTCGTGATAGCTGCTTCGTTCAACAACCCGGCGTATCACAGGCTGCCGCCGGAGGAAGAGGGTACCTCCGCCGGAGATGGACATTCGCCGCCAGTCTCCGGCGGCGGAGAAAGCGGGCATGGACAAGCGGAGTCTTGTGGAATGTCCATGTACAGCTGTCACTTGCCTTCTGATGTGATTTGGGCTCCAGCGGCTAGACCACCACCACCACCGCCACCTTACTGA 834 0.5983 MKGEYVEQQQQQQHPKSETPPSMFSKLQPQHHPFPHHPFQLSAEDAATTAQKANSSGGDGATIEVVRRPRGRPPGSKNKPKPPVIITRDPEPAMSPYILEVSGGNDVVEAIAQFSRRKNMGICVLSGSGTVANVTLRQPSTTPGTTVTFHGRFDILSVSATFLPQQSGASPAVPNGFAISLAGPQGQIVGGLVAGGLMAAGTVFVIAASFNNPAYHRLPPEEEGTSAGDGHSPPVSGGGESGHGQAESCGMSMYSCHLPSDVIWAPAARPPPPPPPY 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01031 277 MobiDBLite consensus disorder prediction 1 90 - -
Pumo10g01031 277 MobiDBLite consensus disorder prediction 1 26 - -
Pumo10g01031 277 FunFam AT-hook motif nuclear-localized protein 95 229 - -
Pumo10g01031 277 Pfam Plants and Prokaryotes Conserved (PCC) domain 96 212 IPR005175 -
Pumo10g01031 277 PIRSF ESCAROLA 2 264 IPR014476 GO:0003680
Pumo10g01031 277 Gene3D - 95 230 - -
Pumo10g01031 277 CDD DUF296 96 210 IPR005175 -
Pumo10g01031 277 ProSiteProfiles PPC domain profile profile. 91 231 IPR005175 -
Pumo10g01031 277 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 48 251 IPR014476 GO:0003680
Pumo10g01031 277 MobiDBLite consensus disorder prediction 44 58 - -
Pumo10g01031 277 MobiDBLite consensus disorder prediction 217 247 - -
Pumo10g01031 277 SUPERFAMILY AF0104/ALDC/Ptd012-like 93 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01031 Pumo-Chr10 13365730 13367363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01031 1 273 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 60.339 3.86e-105 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01031 - - gmx:100788098 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01031 10 13365730 13367363 Pumo10g01031 10 13365730 13367363 ECH