Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00982 ATGTCCAAAATACCCCTCTTCATGCTGAAATTTCCTATTCATTTACTCTTATTGCTCAGTGTCACAGTACCCTTTCAAACAGAAAGTACCGAACAAACAATCCTACTCACCCTCAAACATGAACTGGGGGACCCACTGTCGCTCCAATCATGGAAACCGTCACCGTCGGCGCCATGCGACTGGACGGAGATTCACTGCAGCGGCGGCGCTGTCACAAAGCTCCTCCTCTCCGGCAAAAACATCACCACCAAGAACCTCCCTTCCACAATCTGCAACCTCAAACACCTCTTCAAGCTCAACCTCTCCAACAACTTCATCGCCGGCGAGTTCCCGACAATGTTGTACAACTGCTCCAACCTCCAGCACCTCGACCTATCGGATAACAACCTCGCTGGTCCAATCCCCACCGACGTCGATCGCCTTAAAACACTCACTTACCTCAACCTCGGCAGCAACTACTTCTCTGGCGAGATCCCGACGGCGATTGGAAACCTGCCGGAGTTGCAAACACTGCTCCTTTTCAAAAACAACTTCAACGGAACCATCCCCAGGGAAATTGGAAACTTGTCCAATCTCGAATACTTGGGTTTGGCTTATAACCCTAAGCTCAAACCTGCGAAAATCCCGTTGGAGTTTGCCAAGTTAAGAAAATTGAGGATCATGTGGATGACACAGTGTAACTTGATCGGAGAGATTCCAGAATATTTTGGGAATATTTTCACGAATCTGGAACGGTTGGATTTGTCGTGGAACAATCTAACAGGGAGCATTCCTCAGAGTTTGTTCTCGCTGAGGAAGTTGAAGTTCTTGTACCTGTACTATAACAGGTTGTCGGGTGTAATGCCTAGTCCTACGATGAAGGGTTTGAATTTAACCGAAGTTGATTTCGGTAGGAACAATTTGACGGGTTCCATACCCCGAGAGTTTGGAAACTTGAAGAGTTTGATTACCTTGCACTTGTATTCGAATCACTTGTCTGGCGAGATTCCCACAAGTTTAAGCCTACTTCCTAGTCTCGAGTATTTCAGGGTTTTCAACAATAGCTTGAGTGGAACACTGCCTCCAGAACTAGGCTTGCACTCGAGGCTTGTTGCGGTTGAGGTTTCAGATAATCAACTCAGTGGTGAGTTGCCGAAACATTTGTGTGCAGGTGGTGCTCTCATCGGTGTTGTTGCTTTTTCCAACAATTTTAGCGGGGTTTTGCCTGAATGGATTGGGAATTGTCCTTCTCTCGCCACGGTTCAGGTTTTTAATAATAATTTTTCTGGAGAGGTTCCTTTGGGTTTATGGACTTCGAGGAACCTTTCTTCCTTGGTTTTGAGCAACAATTCCTTTTCTGGGCCTCTTCCAAGTAAAGTGTTTTGGAACACAACGAGGATTGAGATTGCAAATAACAAGTTCTCGGGTAGGATATCTGTTGGGATTACTTCAGCCGCGAATTTGGTGTATTTTGATGCGAGAAACAACATGATTTCTGGTGAAATTCCAAGGGAATTGACACGTCTTTCTCGGCTTAGTACTCTCATGCTTGATGGTAACCAACTTTCTGGTGCACTTCCATCTAAGATTATTTCATGGAAATCACTGAGTACTATGACACTCTCAGGAAACAAACTTTCTGGCGAGATCCCTCTTGCTATGACTGTGCTTCCTAGCTTGGCTTACTTGGACTTGTCTCAAAATGACATATCAGGTGAAATCCCAACTCAGTTTGATAAATTGAGGTTTGTTTTTCTCAACTTGTCCTCGAACCACCTTTATGGGAAAATTCCTGATGAGTTTAATAACCACGCATTTGAAAACAGTTTCTTGAACAATCCTCATCTGTGTGCTTACAATCCAAACGTCAACCTTCCTAAGTGCTTGACCAAAACTGTGTCGGGCTCGAGCAATTCGTCTTCAAAATCACTTGCCCTGATTCTGGCTGCCATCATCGTTGTGTTGTTGGCCATAGCCTCTTTAGTCTTCTATACGTTGAAAACGCAATGGGGCAAAAAGCACTACGGGCATAGTAAGGTTGCAACGTGGAGGGTCACCTCATTCCAGAAGCTTGATCTCACAGAAATAAACTTCCTCTCGAGTTTGACAGACAATAACCTCATAGGAAGTGGAGGGTTTGGGAAAGTTTACCGGATTGCTTCAAATCGTCCAGGTGAGTATGTTGCGGTGAAGAAGATTTGGAATCGCAAGGATGTGGGTGACAAGTTGGAGAAAGAGTTCATGGCTGAGGTTGAGATCCTGGGCAGTATTCGGCACTCAAATATAGTGAAGCTTTTGTGCTGTTATGCAAGTGAGGACTCCAAACTGCTAGTTTATGAATACATGGAAAACCAGAGCCTGGACAAGTGGCTTCATGGAAAGAAGAAAACATCACCTTCTGGGTTGAGCTGGCCAACGAGATTGAATATTGCCATTGGGACTGCTCAAGGTCTGTGTTACATGCACCATGAATGCTCAGCCCCGATCATCCACCGAGATGTCAAATCTAGCAATATACTGTTAGACTCAGAGTTCAGAGCTAAAATAGCAGATTTTGGTCTCGCCAAGATGTTGGCAAAGCCCGGGGAACCACACACCATGTCTGCTCTAGCTGGATCTTTTGGCTACATTCCACCAGAATATGCCTATTCAACTAAGATTAACGAGAAAGTTGATGTATATAGCTTTGGGGTTGTGCTCTTAGAGCTTGTGACGGGAAGAAAGCCTAATAAAGGAGGCGAGCATGCATGCAGCCTAGTTGAATGGGCGTGGGAGTATTTTAGTGAAAGGAAGAGCCTTACTGATGCATTCGATGAGGATATCAAAGATCCACGTTATGCGGAACAAATGACGAGTGTCTTCAAATTAGGCCTCCTTTGCACAAGCTCGTTGCCCTCAACTAGGCCTTCCACGAAGGAGATTTTGCAAGTTCTTCGTCGGTGTTGTCATTCAGGTTCTGCACATAGAAGAGTGGGAAACGAGTTTGATATCACTCCTCTTCTTGGTGATACAAGGTACATCTATAGTTACAAGGAGAGTAATGCTGCAAGCAACAACTCATCTTGGTGA 3048 0.4498 MSKIPLFMLKFPIHLLLLLSVTVPFQTESTEQTILLTLKHELGDPLSLQSWKPSPSAPCDWTEIHCSGGAVTKLLLSGKNITTKNLPSTICNLKHLFKLNLSNNFIAGEFPTMLYNCSNLQHLDLSDNNLAGPIPTDVDRLKTLTYLNLGSNYFSGEIPTAIGNLPELQTLLLFKNNFNGTIPREIGNLSNLEYLGLAYNPKLKPAKIPLEFAKLRKLRIMWMTQCNLIGEIPEYFGNIFTNLERLDLSWNNLTGSIPQSLFSLRKLKFLYLYYNRLSGVMPSPTMKGLNLTEVDFGRNNLTGSIPREFGNLKSLITLHLYSNHLSGEIPTSLSLLPSLEYFRVFNNSLSGTLPPELGLHSRLVAVEVSDNQLSGELPKHLCAGGALIGVVAFSNNFSGVLPEWIGNCPSLATVQVFNNNFSGEVPLGLWTSRNLSSLVLSNNSFSGPLPSKVFWNTTRIEIANNKFSGRISVGITSAANLVYFDARNNMISGEIPRELTRLSRLSTLMLDGNQLSGALPSKIISWKSLSTMTLSGNKLSGEIPLAMTVLPSLAYLDLSQNDISGEIPTQFDKLRFVFLNLSSNHLYGKIPDEFNNHAFENSFLNNPHLCAYNPNVNLPKCLTKTVSGSSNSSSKSLALILAAIIVVLLAIASLVFYTLKTQWGKKHYGHSKVATWRVTSFQKLDLTEINFLSSLTDNNLIGSGGFGKVYRIASNRPGEYVAVKKIWNRKDVGDKLEKEFMAEVEILGSIRHSNIVKLLCCYASEDSKLLVYEYMENQSLDKWLHGKKKTSPSGLSWPTRLNIAIGTAQGLCYMHHECSAPIIHRDVKSSNILLDSEFRAKIADFGLAKMLAKPGEPHTMSALAGSFGYIPPEYAYSTKINEKVDVYSFGVVLLELVTGRKPNKGGEHACSLVEWAWEYFSERKSLTDAFDEDIKDPRYAEQMTSVFKLGLLCTSSLPSTRPSTKEILQVLRRCCHSGSAHRRVGNEFDITPLLGDTRYIYSYKESNAASNNSSW 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00982 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Pumo10g00982 1015 Gene3D Ribonuclease Inhibitor 287 545 IPR032675 -
Pumo10g00982 1015 ProSiteProfiles Protein kinase domain profile. 695 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00982 1015 Pfam Protein kinase domain 697 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00982 1015 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 385 625 - -
Pumo10g00982 1015 Gene3D Ribonuclease Inhibitor 28 203 IPR032675 -
Pumo10g00982 1015 Gene3D Phosphorylase Kinase; domain 1 674 774 - -
Pumo10g00982 1015 Gene3D Ribonuclease Inhibitor 546 639 IPR032675 -
Pumo10g00982 1015 FunFam Kinase family with leucine-rich repeat domain-containing protein 775 987 - -
Pumo10g00982 1015 ProSitePatterns Protein kinases ATP-binding region signature. 701 725 IPR017441 GO:0005524
Pumo10g00982 1015 Pfam Leucine Rich repeat 116 131 IPR001611 GO:0005515
Pumo10g00982 1015 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 284 381 - -
Pumo10g00982 1015 FunFam Receptor-like protein kinase HSL1 675 774 - -
Pumo10g00982 1015 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 207 966 - -
Pumo10g00982 1015 SMART LRR_typ_2 312 335 IPR003591 -
Pumo10g00982 1015 SMART LRR_typ_2 165 189 IPR003591 -
Pumo10g00982 1015 SMART LRR_typ_2 433 456 IPR003591 -
Pumo10g00982 1015 SMART LRR_typ_2 502 526 IPR003591 -
Pumo10g00982 1015 SMART LRR_typ_2 240 264 IPR003591 -
Pumo10g00982 1015 SMART LRR_typ_2 336 360 IPR003591 -
Pumo10g00982 1015 SMART LRR_typ_2 93 117 IPR003591 -
Pumo10g00982 1015 SMART LRR_typ_2 550 573 IPR003591 -
Pumo10g00982 1015 Pfam Leucine rich repeat 226 277 IPR001611 GO:0005515
Pumo10g00982 1015 Gene3D Transferase(Phosphotransferase) domain 1 775 988 - -
Pumo10g00982 1015 SMART serkin_6 695 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00982 1015 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 183 281 - -
Pumo10g00982 1015 Gene3D Ribonuclease Inhibitor 204 286 IPR032675 -
Pumo10g00982 1015 SUPERFAMILY L domain-like 53 380 - -
Pumo10g00982 1015 SUPERFAMILY L domain-like 286 597 - -
Pumo10g00982 1015 SUPERFAMILY Protein kinase-like (PK-like) 686 971 IPR011009 -
Pumo10g00982 1015 Pfam Leucine rich repeat N-terminal domain 32 67 IPR013210 -
Pumo10g00982 1015 FunFam Receptor-like protein kinase HSL1 isoform A 28 180 - -
Pumo10g00982 1015 ProSiteProfiles Leucine-rich repeat profile. 242 264 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00982 Pumo-Chr10 12700394 12703785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00982 20 994 Receptor kinase-like Gene Family AT5G25930 53.619 0.0 999
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo10g00982 Pkinase 9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00982 - K00924 gmx:100782466 1760.35