Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00974 ATGATGTGGCTCAATAGGCACAGGCACAGGCACATTAATACTCTGCTACCACCTACAAAGGGACTAGTACAAAAGTTGTTGGCAGTGATCATGTCGAGCACTTCGTTGAAGGAGATGAGGAACGGTGGTGAGATTGCGGTGACGGAGGATTATAGCAATGGTCATGGTGGGGGTGTGAGGGACTTGTATGGTGAGGATAGTGCCACAGAGGACCAGCTTATCACACCATGGACTTTCTCTGTGGCCAGTGGATGCAGTTTACTGAGAGATCCACGCTACAACAAAGGGCTGGCCTTTACTGAGGGAGAGAGAGATGCTCATTACTTGCGTGGCCTTTTGCCTCCAGCTGTCTTCAATCAAGAGCTTCAGGAAAAGAGGTTGATGCACAATCTCCGCCAGTATGAGGTTCCTCTGCATAGGTACATGGCCATGATGGATCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAGCTTCTGATCGATAATGTTGAGGAACTGCTTCCTGTTGTTTACACTCCAACGGTTGGAGAAGCATGCCAGAAATACGGAAGCATTTTTAGGCGTCCTCAGGGTCTATATATCAGTTTGAAGGAGAAAGGCAAGATCCTTGAAGTACTGAAAAACTGGCCAGAAAAGAGTATTCAAGTTATTGTTGTGACCGATGGTGAGCGTATATTAGGACTTGGAGATCTTGGTTGCCAGGGAATGGGAATTCCTGTTGGGAAACTTTCTCTCTATACTGCATTAGGAGGTGTCCGCCCTTCATCATGCTTGCCTATAACCATTGATGTTGGCACAAACAATGAAAAGTTGCTGAATGATGAGTTTTACATCGGGCTTAAACAAAAGCGGGCAACTGGGAAGGAATATGCTGAGCTTCTAGACGAGTTTATGCGAGCAGTTAAGCAAAACTATGGGGAGAAAGTTCTCATACAGTTTGAAGATTTTGCCAATCATAATGCATTTGATCTGCTGGCAAAATACAGCTCATCTCATCTTGTTTTTAACGATGATATCCAGGGTACAGCATCTGTTGTATTAGCAGGATTGCTTGCATCCCTGAAATTAGTTGGGGGAACCTTAGCTGACCACACCTTCTTATTCCTTGGTGCTGGAGAGGCTGGAACTGGTATAGCTGAGCTGATAGCTCTTGAGATTTCAAAGCAGACTAAAGCTCCAGTGGAAGAGACCCGCAAGAAGATCTGGCTTGTGGATTCAAAGGGACTTATTGTTAGGTCTCGTCTGGAATCACTTCAGCACTTCAAAAAGCCTTGGGCTCACGAGCATGAGCCTGTAAAGGGGCTTCTAGATGCTGTCAAGGCAATCAAGCCAACCGTTTTGATTGGATCATCTGGAGCAGGGAAGACATTTACCAAGGAGAAACCACTCATTCTTGCTCTCTCCAATCCAACTTCACAATCTGAGTGCACAGCTGAAGAAGCTTATACATGGAGCAAGGGTAAAGCAATCTTTGCTAGTGGAAGCCCATTTGATCCTGTTGAATATGAAGGAAAACTTTTTGTTCCTGGACAGGCCAACAATGCTTACATATTTCCTGGTTTTGGCTTGGGTTTGATCATCTCTGGTGCAATCCGTGTGCGCGATGAGATGCTCTTGGCAGCCTGTGAGTACATGCAAACTAGAGAGATTAGATCATCTGAGCATGATAAATTGATAATATACCCATAG 1689 0.4512 MMWLNRHRHRHINTLLPPTKGLVQKLLAVIMSSTSLKEMRNGGEIAVTEDYSNGHGGGVRDLYGEDSATEDQLITPWTFSVASGCSLLRDPRYNKGLAFTEGERDAHYLRGLLPPAVFNQELQEKRLMHNLRQYEVPLHRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLKQKRATGKEYAELLDEFMRAVKQNYGEKVLIQFEDFANHNAFDLLAKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIWLVDSKGLIVRSRLESLQHFKKPWAHEHEPVKGLLDAVKAIKPTVLIGSSGAGKTFTKEKPLILALSNPTSQSECTAEEAYTWSKGKAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAACEYMQTREIRSSEHDKLIIYP 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00974 562 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 63 338 IPR046346 -
Pumo10g00974 562 PANTHER MALIC ENZYME-RELATED 57 562 - -
Pumo10g00974 562 PIRSF ME 50 562 IPR001891 GO:0004470|GO:0004471
Pumo10g00974 562 SMART malic_2 148 329 IPR012301 GO:0004471
Pumo10g00974 562 ProSitePatterns Malic enzymes signature. 335 351 IPR015884 GO:0004471
Pumo10g00974 562 Gene3D - 82 336 IPR037062 GO:0004471
Pumo10g00974 562 Pfam Malic enzyme, NAD binding domain 339 562 IPR012302 GO:0051287
Pumo10g00974 562 Pfam Malic enzyme, N-terminal domain 148 328 IPR012301 GO:0004471
Pumo10g00974 562 Gene3D - 337 562 - -
Pumo10g00974 562 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 339 547 IPR036291 -
Pumo10g00974 562 SMART Malic_M_2 339 559 IPR012302 GO:0051287
Pumo10g00974 562 PRINTS Malic enzyme signature 214 243 IPR001891 GO:0004470|GO:0004471
Pumo10g00974 562 PRINTS Malic enzyme signature 154 178 IPR001891 GO:0004470|GO:0004471
Pumo10g00974 562 PRINTS Malic enzyme signature 366 382 IPR001891 GO:0004470|GO:0004471
Pumo10g00974 562 PRINTS Malic enzyme signature 335 351 IPR001891 GO:0004470|GO:0004471
Pumo10g00974 562 PRINTS Malic enzyme signature 310 328 IPR001891 GO:0004470|GO:0004471
Pumo10g00974 562 PRINTS Malic enzyme signature 459 475 IPR001891 GO:0004470|GO:0004471
Pumo10g00974 562 PRINTS Malic enzyme signature 250 272 IPR001891 GO:0004470|GO:0004471
Pumo10g00974 562 FunFam Malic enzyme 82 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00974 Pumo-Chr10 12631450 12636376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00974 K00029 - gmx:100801564 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00974 10 12631450 12636376 Pumo10g00974 10 12631450 12636376 ECH
Pumo10g00974 10 12631450 12636376 Pumo7g00265 7 3112891 3118463 ECH
Pumo10g00974 10 12631450 12636376 Pumo4g04192 4 82834579 82841316 ECH
Pumo6g03178 6 74586650 74591294 Pumo10g00974 10 12631450 12636376 ECH
Pumo7g00265 7 3112891 3118463 Pumo10g00974 10 12631450 12636376 ECH
Pumo4g04192 4 82834579 82841316 Pumo10g00974 10 12631450 12636376 ECH