Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00939 ATGGCCTCATCCTTAATGTTACCAGCTGCTTCAATGCTGAGACCATGTACCACTTCATCATCATCATGTACTTCATCACGAAGACTTGCTCTCTTTCACCTTGTCACCACTGGTGGTATTGCTCTCCCACAAGCTCAGTTATTTGGTGCAAAAGGACCAGAGTTGTTAAGAGTAGCAGAGGCCTCTGCTGCAGAAAAACTAACCCAACCAGAGAAAAATTTGTTTGACTGGGTCAAAAATGACAACAGAAGATTTCTCCATGTTGTGTACCGTGTTGGAGACTTGGAGAAGACTATAAAGTTCTACACTGAATGCCTTGGCATGAAGCTATTGAGAAAACGTGATATACCTGAAGACAGATATTCTAACGCCTTTCTTGGATATGGGCCTGAAGAGTCCAATTTTACAGTTGAACTTACCTACAATTATGGAGTGGATAACTATGACATTGGTAGTGGCTTTGGTCATTTTGGTGTTGCAGTTGAAGATATTTACAAGAGAGTAGATCTAATAAAGGCAAAAGGAGGAAAGGTTACAAGGGAACCAGGGCCTGTTAAAGATGGCAGTACAGTAATTGCATTCATTGAAGATCCTGATGGTTATAAGTTTGAACTTTTGGAGAGAAGACCTACATCTGAACCCCTGTGCCAAGTGATGCTTCGAGTAGGTGATCTTGATCGTGCCATAGCCTTCTATCAAAAAGCTGTTGGAATGAAACTTCTCCGCAAGAGGGACAACCCTGAGCAGAAGTACACAGTAGCTTTTATGGGCTATGGTCCTGAAGATAAGAATACTGTTCTAGAACTGACATATAACTATGGCGTCACAAATTATGACAAAGGAAATGGTTATGCTCAGATTGCAATAGGCACAAATGATGTCTATAAGACTGCAGAAGCAATCAAATTAAGTGGAGGGAAGATTGTCCGTGAACCTGGGCCCTTGCCAGGTATCAACACCAAGATTGTAGCTTGCTTGGATCCTGATGGTTGGAAATTGGCATTTGTTGACAATGTTGATTTTCTGAAGGAATTAGAGTGA 1041 0.415 MASSLMLPAASMLRPCTTSSSSCTSSRRLALFHLVTTGGIALPQAQLFGAKGPELLRVAEASAAEKLTQPEKNLFDWVKNDNRRFLHVVYRVGDLEKTIKFYTECLGMKLLRKRDIPEDRYSNAFLGYGPEESNFTVELTYNYGVDNYDIGSGFGHFGVAVEDIYKRVDLIKAKGGKVTREPGPVKDGSTVIAFIEDPDGYKFELLERRPTSEPLCQVMLRVGDLDRAIAFYQKAVGMKLLRKRDNPEQKYTVAFMGYGPEDKNTVLELTYNYGVTNYDKGNGYAQIAIGTNDVYKTAEAIKLSGGKIVREPGPLPGINTKIVACLDPDGWKLAFVDNVDFLKELE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00939 346 Gene3D - 57 210 IPR029068 -
Pumo10g00939 346 NCBIfam lactoylglutathione lyase 215 338 IPR004361 GO:0004462|GO:0046872
Pumo10g00939 346 NCBIfam lactoylglutathione lyase 85 209 IPR004361 GO:0004462|GO:0046872
Pumo10g00939 346 FunFam Lactoylglutathione lyase 211 346 - -
Pumo10g00939 346 CDD GlxI_Ni 86 206 - -
Pumo10g00939 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 214 338 IPR037523 -
Pumo10g00939 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 215 338 IPR029068 -
Pumo10g00939 346 Gene3D - 211 346 IPR029068 -
Pumo10g00939 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 83 210 IPR029068 -
Pumo10g00939 346 ProSitePatterns Glyoxalase I signature 1. 87 108 IPR018146 GO:0004462|GO:0046872
Pumo10g00939 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 84 208 IPR037523 -
Pumo10g00939 346 CDD GlxI_Ni 215 336 - -
Pumo10g00939 346 PANTHER LACTOYLGLUTATHIONE LYASE 66 346 - -
Pumo10g00939 346 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 217 335 IPR004360 -
Pumo10g00939 346 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 85 205 IPR004360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00939 Pumo-Chr10 12232366 12235165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00939 217 337 Calmodulin-binding Proteins AT1G08110 26.712 6.89e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00939 K01759 - gmx:100810908 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00939 10 12232366 12235165 Pumo10g00939 10 12232366 12235165 ECH