Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00911 ATGTTTGCACTTGCACCATATTCCCCGGCGGCCACGTCACCACTGCCGCCGTTTGACATCACTCCTCCGCCGCTGCCGGAACCAGCACCGCCTCCATTCCACTCCCCGCCGTCACCACCAATGTATTCGACGTTTCCAGCACCTCCGGTCACCCCGCCGGCGACTTCATCTCCGCCGGTGCCGTCTCCGGAAGCCTTGCTCGTTCAAGATTCGCCGCCACCATCTTCAGTTCCACCACTTCCTCTGACGGTGCCGTCGTTTCGGTCTCCGTCTCCGGCGTCGCCATTTCCACCGTTTTTTGTCACAACATCGCCGCCAACTCCGACCGCCGAATCTCAGCCAGCGCCGTTTCCATTTGCCACAGCGCCTGCAACGACAACGTTTCCGCCGTTTGCAGTTGCACCATCGCCTCCAACTCCAACCGCCACTTTTCCACATGCATTGCCAGAAATGCCTCCGTCACCGCCGGCGGCGGCCACGGTGACTATTCCTCCGCCGCCTCTACCTCTTCCATTCATGACGGAACCTACCTTGGCAACGCCGTCGAGCCCCGCATTGCCGGAACCGGCGCCGGAAGTGAATTTGCCGTCAACAACACCAAATGGAATTTTGCCGCTGGCTGTGGATGTTCAGAAGCCTTCAACCTTCCATGTGTCAAGTGGACTCATTATTGGGCTTGTAGTTGGAGCTATCGTTTTCGTTTTTGTTTTTACCGTTGGATCAGTTCTATGCAGGAATAGGAAGAAAAACAAGCACAAGAATCCGTTCACCCATCGCTATAAGGAATCACCACCCTATGTTGTATCCAAGGGGTCTCATGTTATTCGAGTGCCATCAAATCCAACGCTGCCACCACCTCTGGCTCTCACTGAGGGCGGTGGAGCTTCTGGCTCTTTTAATTCGGTGTCTGTGAAAGCAATTCCAAGAGGTGCCTTTGGTCCCGTGAATGGTATTTTCACGTATGATGAATTATTAGTGGCCACTAAATGCTTCTCTGAGTCCAACCTTCTTGGAGAAGGTGGTTTTGGGTATGTGTACAAAGGAGTTCTCCCATGTGGAAAGGAAATTGCAGTTAAGCAGTTAAAATCAGGAAGCCAACAAGGAGACAGAGAATTTCAAGCTGAGGTTGAGACCATTAGCCGAGTGCATCATAAACATCTTGTTGAATTGGTTGGATACTGCGTTACCAGGGCAGAGAGATTGCTTGTTTACGAATTTGTTCCAAATAACACATTGGAATTCCACTTACATGGGGAGGGGAATACCTTCTTAGAATGGTCAACGAGGATTAAAATTGCCTTGGGATCTGCAAAAGGGCTGGCATATCTACACGAAGATTGCAATCCGGCAATTATTCACCGTGATATTAAAGCATCTAATATTCTTCTTGATTTTAAGTTTGAACCCAAGGTTTCTGACTTTGGCCTGGCAAAAGTCTTCCCTAACACCGATAGTTGCATTAGTCATCTCACCACCCGAGTGATGGGAACCTTTGGGTATCTGGCTCCGGAGTATGCATCAAGTGGTAAATTAACAGATAAATCAGATGTATATTCTTACGGCGTCATGCTTTTAGAACTTATAACCGGACGTCCACCAATCACTGCAGCAGGATCAAGGAATGAGAGCCTCGTTGACTGGGCTAGGCCATTGCTTGCTCAAGCACTACAAGATGGTGACTCCGACAATCTTGTTGATCCAAGGTTGCAGAAAAGTTACCAAGCTGATGAGATGGAAAGCATGATTACCTGTGCAGCTGCTTGTGTGCGCCACTCAGCTAGGCTTCGACCTCGTATGAGCCAAATAGTTGGAGCCTTAGAAGGAGTGGTTTCTCTGACCGATCTTGTTGGAGATGTTACACCGGAGCATACCACAGTGTACAATTGGTCAAATATTTTAGATTATGATGCCAGCCAATACCAGCAGGACATGAGAAATTTCAATTTGGCATTATCAAGTCATAAATACAGCTCCAGTGGGTATAGTGAAACCACTAGTGCTTATGGTCTTCACTCATCAGGCTCAAGTAGTGAGGCTCCGCAATCAATCCTAGACATAGTATAA 2064 0.4893 MFALAPYSPAATSPLPPFDITPPPLPEPAPPPFHSPPSPPMYSTFPAPPVTPPATSSPPVPSPEALLVQDSPPPSSVPPLPLTVPSFRSPSPASPFPPFFVTTSPPTPTAESQPAPFPFATAPATTTFPPFAVAPSPPTPTATFPHALPEMPPSPPAAATVTIPPPPLPLPFMTEPTLATPSSPALPEPAPEVNLPSTTPNGILPLAVDVQKPSTFHVSSGLIIGLVVGAIVFVFVFTVGSVLCRNRKKNKHKNPFTHRYKESPPYVVSKGSHVIRVPSNPTLPPPLALTEGGGASGSFNSVSVKAIPRGAFGPVNGIFTYDELLVATKCFSESNLLGEGGFGYVYKGVLPCGKEIAVKQLKSGSQQGDREFQAEVETISRVHHKHLVELVGYCVTRAERLLVYEFVPNNTLEFHLHGEGNTFLEWSTRIKIALGSAKGLAYLHEDCNPAIIHRDIKASNILLDFKFEPKVSDFGLAKVFPNTDSCISHLTTRVMGTFGYLAPEYASSGKLTDKSDVYSYGVMLLELITGRPPITAAGSRNESLVDWARPLLAQALQDGDSDNLVDPRLQKSYQADEMESMITCAAACVRHSARLRPRMSQIVGALEGVVSLTDLVGDVTPEHTTVYNWSNILDYDASQYQQDMRNFNLALSSHKYSSSGYSETTSAYGLHSSGSSSEAPQSILDIV 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00911 687 FunFam Proline-rich receptor-like protein kinase PERK8 303 406 - -
Pumo10g00911 687 Pfam Protein kinase domain 332 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00911 687 FunFam proline-rich receptor-like protein kinase PERK8 407 621 - -
Pumo10g00911 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Pumo10g00911 687 CDD STKc_IRAK 337 608 - -
Pumo10g00911 687 SMART serkin_6 331 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00911 687 Gene3D Phosphorylase Kinase; domain 1 302 406 - -
Pumo10g00911 687 ProSiteProfiles Protein kinase domain profile. 331 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00911 687 Gene3D Transferase(Phosphotransferase) domain 1 407 617 - -
Pumo10g00911 687 SUPERFAMILY Protein kinase-like (PK-like) 314 606 IPR011009 -
Pumo10g00911 687 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 231 650 IPR047117 -
Pumo10g00911 687 MobiDBLite consensus disorder prediction 1 92 - -
Pumo10g00911 687 MobiDBLite consensus disorder prediction 667 687 - -
Pumo10g00911 687 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Pumo10g00911 687 PRINTS Proline rich extensin signature 37 49 - -
Pumo10g00911 687 PRINTS Proline rich extensin signature 16 32 - -
Pumo10g00911 687 PRINTS Proline rich extensin signature 79 95 - -
Pumo10g00911 687 PRINTS Proline rich extensin signature 54 75 - -
Pumo10g00911 687 MobiDBLite consensus disorder prediction 10 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00911 Pumo-Chr10 11880836 11885427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00911 159 681 Trihelix Transcription Factor Family AT4G32710 50.000 1.67e-144 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pumo10g00911 Pkinase 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00911 - - gmx:100810262 948.732