Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00894 ATGGCGACCACGGAGTCCGATCTCGATTACGAGTTCCCCAATCTCGATTACGAGCTTCGCTATCTGAGTCTCGCCGGAACCGATGCCTTCACCGCTTTTCAAAATCTATTACCGGATGCGATGACTTCATTTTCAACTTGTGGGCTAATCGACCCACTTTGTTCCCAAAACCTCACTCCCAAGCATTCCACCATGACAGCTACCATTGATTCTCAGTCATCGATTTGTGCCACTAGTAATGTTGGCAGTCCAGTGTCAGCTAATAAACCAGACGGCAGAGAGAATCATACGAAAGGAGCCACAAGTGGTTCCTCTGAGCCGTCTGATGAGGATGATGAAGCAGGTCCTTGTGAACAGAGCACAAATCCACTTGATATGAAGCGCCTTAGAAGGAAGGTTTCTAATCGCGAGTCTGCCAGAAGGTCAAGAAGAAGAAAACAAGCGCAATTGGCTGATCTTGAGTTGCAGGTTGAAAAACTGAAAGTGGAAAATGCAACCCTGTACAAGCAGTTCACGGATGCTAGTCAACATTTTCGCGAGGCTGATACGAATAACCGAGTGCTGAAATCAGATGTAGAAGCTTTGAGAGCTAAGGTGAAGTTAGCAGAGGATATGGTCACTAGGAGCTCTTTTACTACGTTAAACAATCAGCATCTTCAGACACAACATCAAATGAGCACACCCCCGCAACTGAACACGACTAATCTGCGCCGCATGGCGCATGTTTCGCCAACCATCACCGTTCATGGAAATGATGCCTCATACAATGGTGTCACTGTTGGTGGACAGAATTCCGCACTTGGAAACTTGGATATGAGTACTTACAACGACATCAACAATGGAGTCATGAACGATGCTATGAGTTGTGGGAATATTTGGCCACTTAACTAG 891 0.4624 MATTESDLDYEFPNLDYELRYLSLAGTDAFTAFQNLLPDAMTSFSTCGLIDPLCSQNLTPKHSTMTATIDSQSSICATSNVGSPVSANKPDGRENHTKGATSGSSEPSDEDDEAGPCEQSTNPLDMKRLRRKVSNRESARRSRRRKQAQLADLELQVEKLKVENATLYKQFTDASQHFREADTNNRVLKSDVEALRAKVKLAEDMVTRSSFTTLNNQHLQTQHQMSTPPQLNTTNLRRMAHVSPTITVHGNDASYNGVTVGGQNSALGNLDMSTYNDINNGVMNDAMSCGNIWPLN 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00894 296 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 130 145 IPR004827 GO:0003700|GO:0006355
Pumo10g00894 296 MobiDBLite consensus disorder prediction 79 148 - -
Pumo10g00894 296 Coils Coil 136 170 - -
Pumo10g00894 296 Gene3D - 126 182 - -
Pumo10g00894 296 SUPERFAMILY Leucine zipper domain 127 176 IPR046347 GO:0003700|GO:0006355
Pumo10g00894 296 SMART brlzneu 123 187 IPR004827 GO:0003700|GO:0006355
Pumo10g00894 296 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 125 188 IPR004827 GO:0003700|GO:0006355
Pumo10g00894 296 Pfam bZIP transcription factor 126 171 IPR004827 GO:0003700|GO:0006355
Pumo10g00894 296 Coils Coil 185 205 - -
Pumo10g00894 296 PANTHER BASIC LEUCINE ZIPPER 63 50 278 - -
Pumo10g00894 296 FunFam BZIP transcription factor 125 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00894 Pumo-Chr10 11670391 11675601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00894 39 294 bZIP Transcription Factor Family AT5G24800 47.909 4.78e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo10g00894 bZIP_1 1.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00894 K25784 - gmx:780555 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00894 10 11670391 11675601 Pumo10g00894 10 11670391 11675601 ECH