Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00891 ATGTCCATGGATCCTCCAAAGAAACCTAATAAAATCAGAGATATTGTGAGGCTTCAACAGATCCTTAAGAAATGGAGAAGGGTAGCCAACTCTTCAAGAACAAGCAGAAGTAACAACAACAGCAGCAGCAACACCACCAGCAGAAGCATCAACTTTCTAAAAAGAACACTTTCTATATCTGAACGTGAGGGAGGAGGATCAAGCAACAACGTTGTTCCCAAGGGCTACGTAGCTGTTTGTGTTGGCGTGGACCTTAACAGGTTCGTTATACCAACCGAATATTTGGGTCACCAAGCCTTTCACATGTTACTCAGAGAAGCTGAGGAAGAATTTGGGTTTGAACAAACTGGGGTTCTGAGAATTCCTTGTGAAGTGTCCGTGTTCGAGAGTATCTTGAAGATAGTGGAGAGAAAGGACAAGTTTTTCACTCAGAAATGTAGATTAAGCATTGAGAAGATGATGGGATACTGTTCCTCAAACCACCTTGCTTATTCTCATCAACCCCAAAGTCCAATGTGCAGATAG 525 0.4248 MSMDPPKKPNKIRDIVRLQQILKKWRRVANSSRTSRSNNNSSSNTTSRSINFLKRTLSISEREGGGSSNNVVPKGYVAVCVGVDLNRFVIPTEYLGHQAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILKIVERKDKFFTQKCRLSIEKMMGYCSSNHLAYSHQPQSPMCR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00891 174 MobiDBLite consensus disorder prediction 26 48 - -
Pumo10g00891 174 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 43 131 IPR003676 GO:0009733
Pumo10g00891 174 Pfam Auxin responsive protein 24 134 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00891 Pumo-Chr10 11637285 11638180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00891 7 174 Calmodulin-binding Proteins AT4G31320 51.282 6.05e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00891 K14488 - gmx:100500385 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00891 10 11637285 11638180 Pumo10g00891 10 11637285 11638180 ECH